Sampling protein conformations and pathways. - Ming Lei; Maria I. Zavodszky; Leslie A. Kuhn; M. F. Thorpe (J. Comput. Chem., 2004)

Quantum correction to the pair distribution function. - V. A. Levashov; Simon J. L. Billinge; M. F. Thorpe (J. Comput. Chem., 2007)

Collective Dynamics Differentiates Functional Divergence in Protein Evolution. - Tyler J. Glembo; Daniel W. Farrell; Z. Nevin Gerek; M. F. Thorpe; S. Banu Ozkan (PLoS Comput. Biol., 2012)

Path Similarity Analysis: A Method for Quantifying Macromolecular Pathways. - Sean L. Seyler; Avishek Kumar; M. F. Thorpe; Oliver Beckstein (PLoS Comput. Biol., 2015)

Correction: Path Similarity Analysis: A Method for Quantifying Macromolecular Pathways. - Sean L. Seyler; Avishek Kumar; M. F. Thorpe; Oliver Beckstein (PLoS Comput. Biol., 2019)