Quantum mechanical charge field molecular dynamics simulation of the TiO2+ ion in aqueous solution. - M. Qaiser Fatmi; Thomas S. Hofer; Bernhard R. Randolf; Bernd M. Rode (J. Comput. Chem., 2007)

T-Analyst: a program for efficient analysis of protein conformational changes by torsion angles. - Rizi Ai; M. Qaiser Fatmi; Chia-en A. Chang (J. Comput. Aided Mol. Des., 2010)

The Role of Oligomerization and Cooperative Regulation in Protein Function: The Case of Tryptophan Synthase. - M. Qaiser Fatmi; Chia-en A. Chang (PLoS Comput. Biol., 2010)