MutSpec: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes. - Maude Ardin; Vincent Cahais; Xavier Castells; Liacine Bouaoun; Graham B. Byrnes; Zdenko Herceg; Jiri Zavadil; Magali Olivier (BMC Bioinform., 2016)

PVAmpliconFinder: a workflow for the identification of human papillomaviruses from high-throughput amplicon sequencing. - Alexis Robitaille; Rosario N. Brancaccio; Sankhadeep Dutta; Dana E. Rollison; Marcis Leja; Nicole Fischer; Adam Grundhoff; Tarik Gheit; Massimo Tommasino; Magali Olivier (BMC Bioinform., 2020)