Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. - Mahdi Golkaram; Stefan Hellander; Brian Drawert; Linda R. Petzold (PLoS Comput. Biol., 2016)

The interplay between cancer type, panel size and tumor mutational burden threshold in patient selection for cancer immunotherapy. - Mahdi Golkaram; Chen Zhao; Kristina Kruglyak; Shile Zhang; Sven Bilke (PLoS Comput. Biol., 2020)

Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization. - Carolina Peixoto; Marta B. Lopes; Marta Martins; Sandra Casimiro; Daniel Sobral; Ana Rita Grosso; Catarina Abreu; Daniela Macedo; Ana Lúcia Costa; Helena Pais; Cecília Alvim; André Mansinho; et al. (BMC Bioinform., 2023)