PROSIGN: A method for protein secondary structure assignment based on three-dimensional coordinates of consecutive Calpha atoms. - Sayed-Rzgar Hosseini; Mehdi Sadeghi; Hamid Pezeshk; Changiz Eslahchi; Mahnaz Habibi (Comput. Biol. Chem., 2008)

Protein complex prediction based on k-connected subgraphs in protein interaction network. - Mahnaz Habibi; Changiz Eslahchi; Limsoon Wong (BMC Syst. Biol., 2010)

Disruption of protein complexes. - Golnaz Taheri; Mahnaz Habibi; Limsoon Wong; Changiz Eslahchi (J. Bioinform. Comput. Biol., 2013)

Disruption of Protein Complexes from Weighted Complex Networks. - Mahnaz Habibi; Pegah Khosravi (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Using informative features in machine learning based method for COVID-19 drug repurposing. - Rosa Aghdam; Mahnaz Habibi; Golnaz Taheri (J. Cheminformatics, 2021)

Comprehensive analysis of pathways in Coronavirus 2019 (COVID-19) using an unsupervised machine learning method. - Golnaz Taheri; Mahnaz Habibi (Appl. Soft Comput., 2022)

A new machine learning method for cancer mutation analysis. - Mahnaz Habibi; Golnaz Taheri (PLoS Comput. Biol., 2022)

Unveiling Driver Modules in Lung Cancer: A Clustering-Based Gene-Gene Interaction Network Analysis. - Golnaz Taheri; Marcell Szalai; Mahnaz Habibi; Panagiotis Papapetrou (PKDD/ECML Workshops (4), 2023)

Uncovering driver genes in breast cancer through an innovative machine learning mutational analysis method. - Golnaz Taheri; Mahnaz Habibi (Comput. Biol. Medicine, 2024)