MRC: Multi Relational Clustering approach. - Majid Rastegar-Mojarad; Behrouz Minaei-Bidgoli (DMIN, 2009)

Automatic detection of drug interaction mismatches in package inserts. - Majid Rastegar-Mojarad; Brian Harrington 001; Steven M. Belknap (ICACCI, 2013)

ResearcherMap: A Tool for Visualizing Author Locations Using Google Maps. - Majid Rastegar-Mojarad; Michael E. Bales; Hong Yu (MedInfo, 2013)

UWM-TRIADS: Classifying Drug-Drug Interactions with Two-Stage SVM and Post-Processing. - Majid Rastegar-Mojarad; Richard D. Boyce; Rashmi Prasad (SemEval@NAACL-HLT, 2013)

Dynamic enhancement of drug product labels to support drug safety, efficacy, and effectiveness. - Richard D. Boyce; John R. Horn; Oktie Hassanzadeh; Anita de Waard; Jodi Schneider; Joanne S. Luciano; Majid Rastegar-Mojarad; Maria Liakata (J. Biomed. Semant., 2013)

Mining massive SNP data for identifying associated SNPs and uncovering gene relationships. - Amy Webb; Aaron Albin; Zhan Ye; Majid Rastegar-Mojarad; Kun Huang 001; Jeffrey D. Parvin; Wolfgang Sadee; Lang Li 001; Simon M. Lin; Yang Xiang (BCB, 2014)

Social Media use for Drug Repurposing: Understanding the consumer perspective. - Majid Rastegar-Mojarad; Hongfang Liu; Priya Nambisan (AMIA, 2015)

Detection of Colorectal Surgical Site Infections Using Bayesian Network and Natural Language Processing. - Sunghwan Sohn; Majid Rastegar-Mojarad; James M. Naessens; Elizabeth B. Habermann; David W. Larson; Hongfang Liu (AMIA, 2015)

Prediction of Colorectal Surgical Site Infections Using Risk Factors. - Sunghwan Sohn; Majid Rastegar-Mojarad; James M. Naessens; Elizabeth B. Habermann; David W. Larson; Hongfang Liu (AMIA, 2015)

A frequency-filtering strategy of obtaining PHI-free sentences from clinical data repository. - Dingcheng Li; Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Yanshan Wang; Saeed Mehrabi 003; Yue Yu; Sunghwan Sohn; Yanpeng Li; Naveed Afzal; Hongfang Liu (BCB, 2015)

A new method for prioritizing drug repositioning candidates extracted by literature-based discovery. - Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Dingcheng Li; Rashmi Prasad; Hongfang Liu (BIBM, 2015)

Toward a Complete Database of Drug Repurposing Candidates Extracted from Social Media, Biomedical Literature, and Genetic Data. - Majid Rastegar-Mojarad; Rashmi Prasad (ICHI, 2015)

Retrieval of Semantically Similar Healthcare Questions in Healthcare Forums. - Yanshan Wang; Saeed Mehrabi 003; Majid Rastegar-Mojarad; Dingcheng Li; Hongfang Liu (ICHI, 2015)

A Frequency-based Strategy of Obtaining Sentences from Clinical Data Repository for Crowdsourcing. - Dingcheng Li; Majid Rastegar-Mojarad; Yanpeng Li; Sunghwan Sohn; Saeed Mehrabi 003; Ravikumar Komandur Elayavilli; Yue Yu; Hongfang Liu (MedInfo, 2015)

Assessing the Need of Discourse-Level Analysis in Identifying Evidence of Drug-Disease Relations in Scientific Literature. - Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Dingcheng Li; Hongfang Liu (MedInfo, 2015)

Application of clinical text data for phenome-wide association studies (PheWASs). - Scott J. Hebbring; Majid Rastegar-Mojarad; Zhan Ye; John Mayer; Crystal Jacobson; Simon M. Lin (Bioinform., 2015)

Toward a complete dataset of drug-drug interaction information from publicly available sources. - Serkan Ayvaz; John R. Horn; Oktie Hassanzadeh; Qian Zhu 003; Johann Stan; Nicholas P. Tatonetti; Santiago Vilar; Mathias Brochhausen; Matthias Samwald; Majid Rastegar-Mojarad; Michel Dumontier; Richard D. Boyce (J. Biomed. Informatics, 2015)

A Topic-modeling Based Framework for Drug-drug Interaction Classification from Biomedical Text. - Dingcheng Li; Sijia Liu 002; Majid Rastegar-Mojarad; Yanshan Wang; Xiaodi Li; Vipin Chaudhary; Terry M. Therneau; Hongfang Liu (AMIA, 2016)

Drug-drug Interaction Detection with A Topic-modeling Based Framework Augmented with Distant-supervision. - Dingcheng Li; Sijia Liu 002; Majid Rastegar-Mojarad; Yanshan Wang; Xiaodi Li; Vipin Chaudhary; Terry M. Therneau; Hongfang Liu (AMIA, 2016)

Discovering Associations between Problem List and Practice Setting. - Liwei Wang 010; Dingcheng Li; Majid Rastegar-Mojarad; Hongfang Liu (AMIA, 2016)

Prioritizing Adverse Drug Reaction and Drug Repositioning Candidates Generated by Literature-Based Discovery. - Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Liwei Wang 010; Rashmi Prasad; Hongfang Liu (BCB, 2016)

MutD - A PubMed Scale Resource for Protein Mutation-Disease Relations through Bio-Medical Literature Mining. - Ravikumar Komandur Elayavilli; Majid Rastegar-Mojarad; Hongfang Liu (ICBO/BioCreative, 2016)

An Ensemble Model of Clinical Information Extraction and Information Retrieval for Clinical Decision Support. - Yanshan Wang; Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Sijia Liu 002; Hongfang Liu (TREC, 2016)

Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL). - Juliane Fluck; Sumit Madan; Sam Ansari; Alpha Tom Kodamullil; Reagon Karki; Majid Rastegar-Mojarad; Natalie L. Catlett; William Hayes; Justyna Szostak; Julia Hoeng; Manuel C. Peitsch (Database J. Biol. Databases Curation, 2016)

'RE: fine drugs': an interactive dashboard to access drug repurposing opportunities. - Soheil Moosavinasab; Jeremy A. Patterson; Robert Strouse; Majid Rastegar-Mojarad; Kelly Regan; Philip R. O. Payne; Yungui Huang; Simon M. Lin (Database J. Biol. Databases Curation, 2016)

BELTracker: evidence sentence retrieval for BEL statements. - Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Hongfang Liu (Database J. Biol. Databases Curation, 2016)

Recommending education materials for diabetic questions using information retrieval approaches. - Yuqun Zeng; Yanshan Wang; Feichen Shen; Sijia Liu 002; Liwei Wang 010; Majid Rastegar-Mojarad; Xusheng Liu; Hongfang Liu (AMIA, 2017)

Dependency and AMR Embeddings for Drug-Drug Interaction Extraction from Biomedical Literature. - Yanshan Wang; Sijia Liu 002; Majid Rastegar-Mojarad; Liwei Wang 010; Feichen Shen; Fei Liu 004; Hongfang Liu (BCB, 2017)

Populating Physician Biographical Pages Based on EMR Data. - Feichen Shen; Sunghwan Sohn; Majid Rastegar-Mojarad; Sijia Liu 002; Joshua J. Pankratz; Michael Hatton; Nancy Sowada; Om Shrestha; Shawna Shurson; Hongfang Liu (CRI, 2017)

Content Analysis of Free-Text Family History. - Yanshan Wang; Liwei Wang 010; Majid Rastegar-Mojarad; Sijia Liu 002; Feichen Shen; Hongfang Liu (CRI, 2017)

Using Unstructured Data to Identify Readmitted Patients. - Majid Rastegar-Mojarad; Jenna K. Lovely; Joshua J. Pankratz; Sunghwan Sohn; Donna M. Ihrke; Amit Merchea; David W. Larson; Hongfang Liu (ICHI, 2017)

Leveraging both Structured and Unstructured Data for Precision Information Retrieval. - Yanshan Wang; Ravikumar Komandur Elayavilli; Majid Rastegar-Mojarad; Hongfang Liu (TREC, 2017)

BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences. - K. E. Ravikumar; Majid Rastegar-Mojarad; Hongfang Liu (Database J. Biol. Databases Curation, 2017)

Leveraging word embeddings and medical entity extraction for biomedical dataset retrieval using unstructured texts. - Yanshan Wang; Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Hongfang Liu (Database J. Biol. Databases Curation, 2017)

Need of informatics in designing interoperable clinical registries. - Majid Rastegar-Mojarad; Sunghwan Sohn; Liwei Wang 010; Feichen Shen; Troy C. Bleeker; William A. Cliby; Hongfang Liu (Int. J. Medical Informatics, 2017)

Standardizing Heterogeneous Annotation Corpora Using HL7 FHIR for Facilitating their Reuse and Integration in Clinical NLP. - Na Hong; Andrew Wen; Majid Rastegar-Mojarad; Sunghwan Sohn; Hongfang Liu; Guoqian Jiang (AMIA, 2018)

BioCreative/OHNLP Challenge 2018. - Majid Rastegar-Mojarad; Sijia Liu 002; Yanshan Wang; Naveed Afzal; Liwei Wang 010; Feichen Shen; Sunyang Fu; Hongfang Liu (BCB, 2018)

Identification of Genetic Causality Statements in Medline Abstracts Leveraging Distant Supervision. - Liwei Wang 010; Majid Rastegar-Mojarad; Ravikumar Komandur Elayavilli; Yanshan Wang; Hongfang Liu (ICHI Workshops, 2018)

Predicting Practice Setting Using Topic Modeling. - Liwei Wang 010; Yanshan Wang; Feichen Shen; Majid Rastegar-Mojarad; Hongfang Liu (ICHI Workshops, 2018)

Extracting chemical-protein relations using attention-based neural networks. - Sijia Liu 002; Feichen Shen; Ravikumar Komandur Elayavilli; Yanshan Wang; Majid Rastegar-Mojarad; Vipin Chaudhary; Hongfang Liu (Database J. Biol. Databases Curation, 2018)

A comparison of word embeddings for the biomedical natural language processing. - Yanshan Wang; Sijia Liu 002; Naveed Afzal; Majid Rastegar-Mojarad; Liwei Wang 010; Feichen Shen; Paul R. Kingsbury; Hongfang Liu (J. Biomed. Informatics, 2018)

Clinical information extraction applications: A literature review. - Yanshan Wang; Liwei Wang 010; Majid Rastegar-Mojarad; Sungrim Moon; Feichen Shen; Naveed Afzal; Sijia Liu 002; Yuqun Zeng; Saeed Mehrabi 003; Sunghwan Sohn; Hongfang Liu (J. Biomed. Informatics, 2018)

The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track. - Sumit Madan; Justyna Szostak; Ravikumar Komandur Elayavilli; Richard Tzong-Han Tsai; Mehdi Ali; Longhua Qian; Majid Rastegar-Mojarad; Julia Hoeng; Juliane Fluck (Database J. Biol. Databases Curation, 2019)

Rare disease knowledge enrichment through a data-driven approach. - Feichen Shen; Yiqing Zhao; Liwei Wang 010; Majid Rastegar-Mojarad; Yanshan Wang; Sijia Liu 002; Hongfang Liu (BMC Medical Informatics Decis. Mak., 2019)

Discovering associations between problem list and practice setting. - Liwei Wang 010; Yanshan Wang; Feichen Shen; Majid Rastegar-Mojarad; Hongfang Liu (BMC Medical Informatics Decis. Mak., 2019)

MedSTS: a resource for clinical semantic textual similarity. - Yanshan Wang; Naveed Afzal; Sunyang Fu; Liwei Wang 010; Feichen Shen; Majid Rastegar-Mojarad; Hongfang Liu (Lang. Resour. Evaluation, 2020)

Enhancing systematic literature reviews with generative artificial intelligence: development, applications, and performance evaluation. - Ying Li; Surabhi Datta; Majid Rastegar-Mojarad; Kyeryoung Lee; Hunki Paek; Julie Glasgow; Chris Liston; Long He; Xiaoyan Wang; Yingxin Xu (J. Am. Medical Informatics Assoc., 2025)