A guide and best practices for R/Bioconductor tool integration in Galaxy. - Nitesh Turaga; Mallory Ann Freeberg; Dannon Baker; John Chilton; The Galaxy Team; Anton Nekrutenko; James Taylor 001 (F1000Research, 2016)

The European Genome-phenome Archive in 2021. - Mallory Ann Freeberg; Lauren A. Fromont; Teresa D'altri; Anna Foix Romero; Jorge Izquierdo Ciges; Aina Jene; Giselle Kerry; Mauricio Moldes; Roberto Ariosa; Silvia Bahena; Daniel Barrowdale; Marcos Casado Barbero; et al. (Nucleic Acids Res., 2022)

EMBL's European Bioinformatics Institute (EMBL-EBI) in 2022. - Matthew Thakur; Alex Bateman; Cath Brooksbank; Mallory Ann Freeberg; Melissa Harrison; Matthew Hartley; Thomas M. Keane; Gerard J. Kleywegt; Andrew Leach; Maria Levchenko; Sarah L. Morgan; Ellen M. McDonagh; et al. (Nucleic Acids Res., 2023)

Sharing sensitive data in life sciences: an overview of centralized and federated approaches. - Maria Alexandra Rujano; Jan-Willem Boiten; Christian Ohmann; Steve Canham; Sergio Contrino; Romain David 001; Jonathan Ewbank; Claudia Filippone; Claire Connellan; Ilse Custers; Rick van Nuland; Michaela Theresia Mayrhofer; et al. (Briefings Bioinform., 2024)