morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring. - Ines Wagner; Michael Volkmer; Malvika Sharan; Jose M. Villaveces; Felix Oswald; Vineeth Surendranath; Bianca Habermann (BMC Bioinform., 2014)

Ten Simple Rules for Organizing an Unconference. - Aidan Budd; Holger Dinkel; Manuel Corpas; Jonathan C. Fuller; Laura Rubinat; Damien P. Devos; Pierre H. Khoueiry; Konrad U. Förstner; Fotis Georgatos; Francis Rowland; Malvika Sharan; Janos X. Binder; et al. (PLoS Comput. Biol., 2015)

Bio-computational identification and characterization of RNA-binding proteins in bacteria (Bioinformatische Identifikation und Charakterisierung von RNA-bindenden Proteinen in Bakterien) - Malvika Sharan (2017)

The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR. - Daniel Wibberg; Bérénice Batut; Peter Belmann; Jochen Blom; Frank Oliver Glöckner; Björn A. Grüning; Nils Hoffmann; Nils Kleinbölting; René Rahn; Maja Rey; Uwe Scholz; Malvika Sharan; et al. (F1000Research, 2019)

Ten simple rules for establishing a mentorship programme. - Anne M. Treasure; Siobhan Mackenzie Hall; Igor Lesko; Derek Moore; Malvika Sharan; Menno van Zaanen; Yo Yehudi; Anelda van der Walt (PLoS Comput. Biol., 2022)

Unicorns Do Not Exist: Employing and Appreciating Community Managers in Open Source. - Raphael Sonabend; Anna Carnegie; Anne Lee Steele; Marie Nugent; Malvika Sharan (CoRR, 2024)

Ten simple rules for pushing boundaries of inclusion at academic events. - Siobhan Mackenzie Hall; Daniel Kochin; Carmel Carne; Patricia Herterich; Kristen Lenay Lewers; Mohamed Abdelhack; Arun Ramasubramanian; Juno Felecia Michael Alphonse; Visotheary Ung; Sara El-Gebali; Christopher Brian Currin; Esther Plomp; et al. (PLoS Comput. Biol., 2024)

Ten simple rules for building and maintaining a responsible data science workflow. - Sara Stoudt; Yacine Jernite; Brandeis Marshall; Ben Marwick; Malvika Sharan; Kirstie Whitaker; Valentin Danchev (PLoS Comput. Biol., 2024)