BEDAM binding free energy predictions for the SAMPL4 octa-acid host challenge. - Emilio Gallicchio; Haoyuan Chen; He Chen; Michael Fitzgerald; Yang Gao 019; Peng He; Malathi Kalyanikar; Chuan Kao; Beidi Lu; Yijie Niu; Manasi A. Pethe; Jie Zhu; et al. (J. Comput. Aided Mol. Des., 2015)

MFPred: Rapid and accurate prediction of protein-peptide recognition multispecificity using self-consistent mean field theory. - Aliza B. Rubenstein; Manasi A. Pethe; Sagar D. Khare (PLoS Comput. Biol., 2017)