Network Models of TEM β-Lactamase Mutations Coevolving under Antibiotic Selection Show Modular Structure and Anticipate Evolutionary Trajectories. - Violeta Beleva Guthrie; Jennifer Allen; Manel Camps; Rachel Karchin (PLoS Comput. Biol., 2011)

Identifying Selections Operating on HIV-1 Reverse Transcriptase via Uniform Manifold Approximation and Projection: Code available at github.com/shefaliqamar/HIV-Epistatic. - Shefali Qamar; Jay Kim; Manel Camps (ICBRA, 2022)

Identifying Selections Operating on HIV-1 Reverse Transcriptase via Uniform Manifold Approximation and Projection. - Shefali Qamar; Manel Camps; Jay Kim (CoRR, 2022)