Genome-wide synteny through highly sensitive sequence alignment: Satsuma. - Manfred G. Grabherr; Pamela H. Russell; Miriah D. Meyer; Evan Mauceli; Jessica Alföldi; Federica Di Palma; Kerstin Lindblad-Toh (Bioinform., 2010)

A universal genomic coordinate translator for comparative genomics. - Neda Zamani; Görel Sundström; Jennifer R. S. Meadows; Marc P. Höppner; Jacques Dainat; Henrik Lantz; Brian J. Haas; Manfred G. Grabherr (BMC Bioinform., 2014)

Modular and configurable optimal sequence alignment software: Cola. - Neda Zamani; Görel Sundström; Marc P. Höppner; Manfred G. Grabherr (Source Code Biol. Medicine, 2014)

Whiteboard: a framework for the programmatic visualization of complex biological analyses. - Görel Sundström; Neda Zamani; Manfred G. Grabherr; Evan Mauceli (Bioinform., 2015)

Combinatorial identification of DNA methylation patterns over age in the human brain. - Behrooz Torabi Moghadam; Michal Dabrowski; Bozena Kaminska; Manfred G. Grabherr; Jan Komorowski (BMC Bioinform., 2016)

RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study. - Bork A. Berghoff; Torgny Karlsson; Thomas Källman; E. Gerhart H. Wagner; Manfred G. Grabherr (BioData Min., 2017)

microTaboo: a general and practical solution to the k-disjoint problem. - Mohammed Al-Jaff; Eric Sandström; Manfred G. Grabherr (BMC Bioinform., 2017)

RiBoSOM: rapid bacterial genome identification using self-organizing map implemented on the synchoros SiLago platform. - Yu Yang; Dimitrios Stathis 001; Prashant Sharma; Kolin Paul; Ahmed Hemani; Manfred G. Grabherr; Rafi Ahmad (SAMOS, 2018)

Approximate Computing Applied to Bacterial Genome Identification using Self-Organizing Maps. - Dimitrios Stathis 001; Yu Yang; Saurabh Tewari; Ahmed Hemani; Kolin Paul; Manfred G. Grabherr; Rafi Ahmad (ISVLSI, 2019)

SumStatsRehab: an efficient algorithm for GWAS summary statistics assessment and restoration. - Mykyta Matushyn; Madhuchanda Bose; Abdallah Amr Mahmoud; Lewis Cuthbertson; Carlos Tello 002; Karatug Ozan Bircan; Andrew Terpolovsky; Varuna Bamunusinghe; Umar Khan; Biljana Novkovic; Manfred G. Grabherr; Puya G. Yazdi (BMC Bioinform., 2022)

Flexible Machine Learning Algorithms for Clinical Gait Assessment Tools. - Christian Greve; Hobey Tam; Manfred G. Grabherr; Aditya Ramesh; Bart Scheerder; Juha M. Hijmans (Sensors, 2022)

MindReader: Unsupervised Classification of Electroencephalographic Data. - Salvador Daniel Rivas-Carrillo; Evgeny E. Akkuratov; Hector Valdez Ruvalcaba; Angel Vargas-Sanchez; Jan Komorowski; Daniel San-Juan; Manfred G. Grabherr (Sensors, 2023)