An immune inspired unsupervised intrusion detection system for detection of novel attacks. - Manjari Jha; Raj Acharya (ISI, 2016)

A Generalized Lattice Based Probabilistic Approach for Metagenomic Clustering. - Manjari Jha; Raunaq Malhotra; Raj Acharya (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

ViPRA-Haplo: De Novo Reconstruction of Viral Populations Using Paired End Sequencing Data. - Weiling Li; Raunaq Malhotra; Steven H. Wu; Manjari Jha; Allen G. Rodrigo; Mary Poss; Raj Acharya (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)