Codon catalog usage is a genome strategy modulated for gene expressivity. - Richard Grantham; Christian Gautier; Manolo Gouy; Monique Jacobzone; R. Mercier (Nucleic Acids Res., 1981)

ACNUC: a nucleic acid sequence data base and analysis system. - Manolo Gouy; F. Milleret; C. Mugnier; M. Jacobzone; Christian Gautier (Nucleic Acids Res., 1984)

An energy model that predicts the correct folding of both the tRNA and the 5S RNA molecules. - Catherine Papanicolaou; Manolo Gouy; Jacques Ninio (Nucleic Acids Res., 1984)

ACNUC - a portable retrieval system for nucleic acid sequence databases: logical and physical designs and usage. - Manolo Gouy; Christian Gautier; Marcella Attimonelli; Cecilia Lanave; G. di Paola (Comput. Appl. Biosci., 1985)

Interfacing similarity search software with the sequence retrieval system ACNUC. - Desmond G. Higgins; Manolo Gouy (Comput. Appl. Biosci., 1987)

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. - Nicolas Galtier; Manolo Gouy; Christian Gautier (Comput. Appl. Biosci., 1996)

The non-redundant Bacillus subtilis (NRSub) database: update 1998. - Guy Perrière; Manolo Gouy; Takashi Gojobori (Nucleic Acids Res., 1998)

Automatic RNA Secondary Structure Prediction with a Comparative Approach. - Fariza Tahi; Manolo Gouy; Mireille Régnier (Comput. Chem., 2002)

Integrated databanks access and sequence/structure analysis services at the PBIL. - Guy Perrière; Christophe Combet; Simon Penel; Christophe Blanchet; Jean Thioulouse; Christophe Geourjon; Julien Grassot; Céline Charavay; Manolo Gouy; Laurent Duret; Gilbert Deléage (Nucleic Acids Res., 2003)

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases. - Jean-François Dufayard; Laurent Duret; Simon Penel; Manolo Gouy; François Rechenmann; Guy Perrière (Bioinform., 2005)

HoSeqI: automated homologous sequence identification in gene family databases. - Anne-Muriel Arigon; Guy Perrière; Manolo Gouy (Bioinform., 2006)

Databases of homologous gene families for comparative genomics. - Simon Penel; Anne-Muriel Arigon; Jean-François Dufayard; Anne-Sophie Sertier; Vincent Daubin; Laurent Duret; Manolo Gouy; Guy Perrière (BMC Bioinform., 2009)

Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests. - Sophie S. Abby; Eric Tannier; Manolo Gouy; Vincent Daubin (BMC Bioinform., 2010)

leBIBI QBPP : a set of databases and a webtool for automatic phylogenetic analysis of prokaryotic sequences. - Jean-Pierre Flandrois; Guy Perrière; Manolo Gouy (BMC Bioinform., 2015)

Treerecs: an integrated phylogenetic tool, from sequences to reconciliations. - Nicolas Comte; Benoit Morel; Damir Hasic; Laurent Guéguen; Bastien Boussau; Vincent Daubin; Simon Penel; Céline Scornavacca; Manolo Gouy; Alexandros Stamatakis; Eric Tannier; David P. Parsons (Bioinform., 2020)