Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy. - Guangan Hu; Manuel Llinás; Jingguang Li; Peter Rainer Preiser; Zbynek Bozdech (BMC Bioinform., 2007)

Using context to improve protein domain identification. - Alejandro Ochoa; Manuel Llinás; Mona Singh 001 (BMC Bioinform., 2011)

Beyond the E-Value: Stratified Statistics for Protein Domain Prediction. - Alejandro Ochoa; John D. Storey; Manuel Llinás; Mona Singh 001 (PLoS Comput. Biol., 2015)