COCO Denoiser: Using Co-Coercivity for Variance Reduction in Stochastic Convex Optimization. - Manuel Madeira; Renato M. P. Negrinho; João Xavier 001; Pedro M. Q. Aguiar (CoRR, 2021)

Tertiary Lymphoid Structures Generation Through Graph-Based Diffusion. - Manuel Madeira; Dorina Thanou; Pascal Frossard (GRAIL/OCELOT@MICCAI, 2023)

A Novel Pipeline for Data Management and Analysis that Integrates Data Lakehouse Architecture into the Aeronautics Industry. - Nelson Freitas; Diogo Vaqueira; André Dionísio Rocha; José Barata; Fábio Serrano; Luís Silva; Manuel Madeira (IN4PL (1), 2024)

Generative Modelling of Structurally Constrained Graphs. - Manuel Madeira; Clément Vignac; Dorina Thanou; Pascal Frossard (NeurIPS, 2024)

DeFoG: Discrete Flow Matching for Graph Generation. - Yiming Qin; Manuel Madeira; Dorina Thanou; Pascal Frossard (CoRR, 2024)

Revisiting Automatic Data Curation for Vision Foundation Models in Digital Pathology. - Boqi Chen; Cédric Vincent-Cuaz; Lydia A. Schoenpflug; Manuel Madeira; Lisa Fournier; Vaishnavi Subramanian; Sonali Andani; Samuel Ruipérez-Campillo; Julia E. Vogt; Raphaëlle Luisier; Dorina Thanou; Viktor H. Koelzer; et al. (CoRR, 2025)

Generating Directed Graphs with Dual Attention and Asymmetric Encoding. - Alba Carballo-Castro; Manuel Madeira; Yiming Qin; Dorina Thanou; Pascal Frossard (CoRR, 2025)