Reconciling kinetic and thermodynamic models of bacterial transcription. - Muir Morrison; Manuel Razo-Mejia; Rob Phillips (PLoS Comput. Biol., 2021)

AutoEncoderToolkit.jl: A Julia package for training (Variational) Autoencoders. - Manuel Razo-Mejia (J. Open Source Softw., 2024)

Bayesian inference of relative fitness on high-throughput pooled competition assays. - Manuel Razo-Mejia; Madhav Mani; Dmitri Petrov (PLoS Comput. Biol., 2024)