Mining genetic, transcriptomic and imaging data in Parkinson's disease. - Guglielmo Cerri; Manuel Tognon; André Altmann; Rosalba Giugno (ICHI, 2021)

GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs. - Manuel Tognon; Vincenzo Bonnici; Erik Garrison; Rosalba Giugno; Luca Pinello (PLoS Comput. Biol., 2021)

A survey on algorithms to characterize transcription factor binding sites. - Manuel Tognon; Rosalba Giugno; Luca Pinello (Briefings Bioinform., 2023)

Benchmarking transcription factor binding site prediction models: a comparative analysis on synthetic and biological data. - Manuel Tognon; Alisa Kumbara; Andrea Betti; Lorenzo Ruggeri; Rosalba Giugno (Briefings Bioinform., 2025)