S5CL: Unifying Fully-Supervised, Self-supervised, and Semi-supervised Learning Through Hierarchical Contrastive Learning. - Manuel Tran; Sophia J. Wagner; Melanie Boxberg; Tingying Peng (MICCAI (2), 2022)

B-Cos Aligned Transformers Learn Human-Interpretable Features. - Manuel Tran; Amal Lahiani; Yashin Dicente Cid; Melanie Boxberg; Peter Lienemann; Christian Matek; Sophia J. Wagner; Fabian J. Theis; Eldad Klaiman; Tingying Peng (MICCAI (8), 2023)

Training Transitive and Commutative Multimodal Transformers with LoReTTa. - Manuel Tran; Yashin Dicente Cid; Amal Lahiani; Fabian J. Theis; Tingying Peng; Eldad Klaiman (NeurIPS, 2023)

Navigating Through Whole Slide Images With Hierarchy, Multi-Object, and Multi-Scale Data. - Manuel Tran; Sophia J. Wagner; Wilko Weichert; Christian Matek; Melanie Boxberg; Tingying Peng (IEEE Trans. Medical Imaging, 2025)