Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards. - Jose Espinosa-Carrasco; Antonio Hermoso Pulido; Ionas Erb; Mara Dierssen; Julia V. Ponomarenko; Cédric Notredame (Nucleic Acids Res., 2019)

Meta-analysis of transcriptomic data reveals clusters of consistently deregulated gene and disease ontologies in Down syndrome. - Ilario De Toma; Cesar Sierra; Mara Dierssen (PLoS Comput. Biol., 2021)

Modeling the impact of neuromorphological alterations in Down syndrome on fast neural oscillations. - Pau Clusella; Linus Manubens-Gil; Jordi García-Ojalvo; Mara Dierssen (PLoS Comput. Biol., 2024)

A novel way to use cross-validation to measure connectivity by machine learning allows epilepsy surgery outcome prediction. - Karla Ivankovic; Alessandro Principe; Justo Montoya-Gálvez; Linus Manubens-Gil; Riccardo Zucca; Pablo Villoslada; Mara Dierssen; Rodrigo Rocamora (NeuroImage, 2025)