Dynamic Profiling and Trace Cache Generation. - Marc Berndl; Laurie J. Hendren (CGO, 2003)

Points-to analysis using BDDs. - Marc Berndl; Ondrej Lhoták; Feng Qian; Laurie J. Hendren; Navindra Umanee (PLDI, 2003)

Mixed mode execution with context threading. - Mathew Zaleski; Marc Berndl; Angela Demke Brown (CASCON, 2005)

Context Threading: A Flexible and Efficient Dispatch Technique for Virtual Machine Interpreters. - Marc Berndl; Benjamin Vitale; Mathew Zaleski; Angela Demke Brown (CGO, 2005)

Molecular graph convolutions: moving beyond fingerprints. - Steven Kearnes; Kevin McCloskey; Marc Berndl; Vijay S. Pande; Patrick Riley 001 (J. Comput. Aided Mol. Des., 2016)

Assessing microscope image focus quality with deep learning. - Samuel J. Yang; Marc Berndl; D. Michael Ando; Mariya Barch; Arunachalam Narayanaswamy; Eric Christiansen; Stephan Hoyer; Chris Roat; Jane Hung; Curtis T. Rueden; Asim Shankar; Steven Finkbeiner; et al. (BMC Bioinform., 2018)

It's easy to fool yourself: Case studies on identifying bias and confounding in bio-medical datasets. - Subhashini Venugopalan; Arunachalam Narayanaswamy; Samuel J. Yang; Anton Gerashcenko; Scott Lipnick; Nina Makhortova; James Hawrot; Christine Marques; João Pereira; Michael P. Brenner; Lee Rubin; Brian Wainger; et al. (CoRR, 2019)