Fully Automated and Adaptive Detection of Amyloid Plaques in Stained Brain Sections of Alzheimer Transgenic Mice. - Abdelmonem Feki; Olivier Teboul; Albertine Dubois; Bruno Bozon; Alexis Faure; Philippe Hantraye; Marc Dhenain; Benoît Delatour; Thierry Delzescaux (MICCAI (2), 2007)

Segmentation of Anatomo-Functional 3D Post Mortem Data Using a MRI-Based 3D Digital Atlas: Transgenic Mouse Brains Study. - Jessica Lebenberg; Anne-Sophie Hérard; Albertine Dubois; Marc Dhenain; Philippe Hantraye; Vincent Frouin; Thierry Delzescaux (ISBI, 2009)

Detection by voxel-wise statistical analysis of significant changes in regional cerebral glucose uptake in an APP/PS1 transgenic mouse model of Alzheimer's disease. - Albertine Dubois; Anne-Sophie Hérard; Benoît Delatour; Philippe Hantraye; Gilles Bonvento; Marc Dhenain; Thierry Delzescaux (NeuroImage, 2010)

Validation of MRI-based 3D digital atlas registration with histological and autoradiographic volumes: An anatomofunctional transgenic mouse brain imaging study. - Jessica Lebenberg; Anne-Sophie Hérard; Albertine Dubois; Julien Dauguet; Vincent Frouin; Marc Dhenain; Philippe Hantraye; Thierry Delzescaux (NeuroImage, 2010)

A combination of atlas-based and voxel-wise approaches to analyze metabolic changes in autoradiographic data from Alzheimer's mice. - Jessica Lebenberg; Anne-Sophie Hérard; Albertine Dubois; Marc Dhenain; Philippe Hantraye; Thierry Delzescaux (NeuroImage, 2011)

Fast in vivo imaging of amyloid plaques using μ-MRI Gd-staining combined with ultrasound-induced blood-brain barrier opening. - Mathieu D. Santin; Thomas Debeir; S. Lori Bridal; Thomas Rooney; Marc Dhenain (NeuroImage, 2013)

Robust supervised segmentation of neuropathology whole-slide microscopy images. - Michel E. Vandenberghe; Yaël Balbastre; Nicolas Souedet; Anne-Sophie Hérard; Marc Dhenain; Frédérique Frouin; Thierry Delzescaux (EMBC, 2015)

Animal Functional Magnetic Resonance Imaging: Trends and Path Toward Standardization. - Francesca Mandino; Domenic H. Cerri; Clément M. Garin; Milou Straathof; Geralda A. F. van Tilborg; M. Mallar Chakravarty; Marc Dhenain; Rick M. Dijkhuizen; Alessandro Gozzi; Andreas Hess 001; Shella D. Keilholz; Jason P. Lerch; et al. (Frontiers Neuroinformatics, 2019)

A 3D population-based brain atlas of the mouse lemur primate with examples of applications in aging studies and comparative anatomy. - Nachiket Nadkarni; Salma Bougacha; Clément M. Garin; Marc Dhenain; Jean-Luc Picq (NeuroImage, 2019)

Sammba-MRI: A Library for Processing SmAll-MaMmal BrAin MRI Data in Python. - Marina Celestine; Nachiket Nadkarni; Clément M. Garin; Salma Bougacha; Marc Dhenain (Frontiers Neuroinformatics, 2020)

An Automated Open-Source Workflow for Standards-Compliant Integration of Small Animal Magnetic Resonance Imaging Data. - Horea-Ioan Ioanas; Markus Marks; Clément M. Garin; Marc Dhenain; Mehmet Fatih Yanik; Markus Rudin (Frontiers Neuroinformatics, 2020)

Resting state functional atlas and cerebral networks in mouse lemur primates at 11.7 Tesla. - Clément M. Garin; Nachiket Nadkarni; Brigitte Landeau; Gaël Chételat; Jean-Luc Picq; Salma Bougacha; Marc Dhenain (NeuroImage, 2021)

Whole brain mapping of glutamate distribution in adult and old primates at 11.7T. - Clément M. Garin; Nachiket Nadkarni; Jérémy Pépin; Julien Flament; Marc Dhenain (NeuroImage, 2022)