Simultaneous integration of mixed quantum-classical systems by density matrix evolution equations using interaction representation and adaptive time step integrator. - Marc F. Lensink; Janez Mavri; Herman J. C. Berendsen (J. Comput. Chem., 1996)

Simulation of slow reaction with quantum character: Neutral hydrolysis of carboxylic ester. - Marc F. Lensink; Janez Mavri; Herman J. C. Berendsen (J. Comput. Chem., 1999)

Relating destabilizing regions to known functional sites in proteins. - Benoit H. Dessailly; Marc F. Lensink; Shoshana J. Wodak (BMC Bioinform., 2007)

LigASite - a database of biologically relevant binding sites in proteins with known apo-structures. - Benoit H. Dessailly; Marc F. Lensink; Christine A. Orengo; Shoshana J. Wodak (Nucleic Acids Res., 2008)

RINspector: a Cytoscape app for centrality analyses and DynaMine flexibility prediction. - Guillaume Brysbaert; Kevin Lorgouilloux; Wim F. Vranken; Marc F. Lensink (Bioinform., 2018)

Comparing protein structures with RINspector automation in Cytoscape. - Guillaume Brysbaert; Théo Mauri; Marc F. Lensink (F1000Research, 2018)

Centrality Measures in Residue Interaction Networks to Highlight Amino Acids in Protein-Protein Binding. - Guillaume Brysbaert; Marc F. Lensink (Frontiers Bioinform., 2021)

MassiveFold: unveiling AlphaFold's hidden potential with optimized and parallelized massive sampling. - Nessim Raouraoua; Claudio Mirabello; Thibaut Véry; Christophe Blanchet; Björn Wallner; Marc F. Lensink; Guillaume Brysbaert (Nat. Comput. Sci., 2024)