Venn Mapping: clustering of heterologous microarray data based on the number of co-occurring differentially expressed genes. - Marcel Smid; Lambert C. J. Dorssers; Guido Jenster (Bioinform., 2003)

GO-Mapper: functional analysis of gene expression data using the expression level as a score to evaluate Gene Ontology terms. - Marcel Smid; Lambert C. J. Dorssers (Bioinform., 2004)

Storing, linking, and mining microarray databases using SRS. - Antoine Veldhoven; Don de Lange; Marcel Smid; Victor de Jager; Jan A. Kors; Guido Jenster (BMC Bioinform., 2005)

Gene length corrected trimmed mean of M-values (GeTMM) processing of RNA-seq data performs similarly in intersample analyses while improving intrasample comparisons. - Marcel Smid; Robert R. J. Coebergh van den Braak; Harmen J. G. van de Werken; Job van Riet; Anne van Galen; Vanja de Weerd; Michelle van der Vlugt-Daane; Sandra I. Bril; Zarina S. Lalmahomed; Wigard P. Kloosterman; Saskia M. Wilting; John A. Foekens; et al. (BMC Bioinform., 2018)