A fast algorithm for local minimum and maximum filters on rectangular and octagonal kernels. - Marcel van Herk (Pattern Recognit. Lett., 1992)

Evaluation of Cost Functions for Gray Value Matching of 2D Images in Radiotherapy. - Niels Dekker; Lennert S. Ploeger; Marcel van Herk (MICCAI, 2001)

Image Guided Radiotherapy of the Prostate. - David A. Jaffray; Marcel van Herk; Joos Lebesque; Alvaro Martinez (MICCAI, 2001)

On-the-Fly Motion-Compensated Cone-Beam CT Using an a Priori Motion Model. - Simon Rit; Jochem Wolthaus; Marcel van Herk; Jan-Jakob Sonke (MICCAI (1), 2008)

Detection of In Vivo Dynamic 3-D Motion Patterns in the Wrist Joint. - Bart Carelsen; Remmet Jonges; Simon D. Strackee; Mario Maas; Patricia van Kemenade; Cornelis A. Grimbergen; Marcel van Herk; Geert J. Streekstra (IEEE Trans. Biomed. Eng., 2009)

Diversifying Multi-Objective Gradient Techniques and their Role in Hybrid Multi-Objective Evolutionary Algorithms for Deformable Medical Image Registration. - Kleopatra Pirpinia; Tanja Alderliesten; Jan-Jakob Sonke; Marcel van Herk; Peter A. N. Bosman (GECCO, 2015)

On the usefulness of gradient information in multi-objective deformable image registration using a B-spline-based dual-dynamic transformation model: comparison of three optimization algorithms. - Kleopatra Pirpinia; Peter A. N. Bosman; Jan-Jakob Sonke; Marcel van Herk; Tanja Alderliesten (Image Processing, 2015)

A first step toward uncovering the truth about weight tuning in deformable image registration. - Kleopatra Pirpinia; Peter A. N. Bosman; Jan-Jakob Sonke; Marcel van Herk; Tanja Alderliesten (Image Processing, 2016)

Dynamic CT perfusion image data compression for efficient parallel processing. - Renan Sales Barros; Sílvia Delgado Olabarriaga; Jordi Borst; Marianne A. A. van Walderveen; Jorrit S. Posthuma; Geert J. Streekstra; Marcel van Herk; Charles B. L. M. Majoie; Henk A. Marquering (Medical Biol. Eng. Comput., 2016)

The influence of automation on tumor contouring. - Anet Aselmaa; Marcel van Herk; Yu Song 003; Richard H. M. Goossens; Anne Laprie (Cogn. Technol. Work., 2017)

Using a contextualized sensemaking model for interaction design: A case study of tumor contouring. - Anet Aselmaa; Marcel van Herk; Anne Laprie; Ursula Nestle; Irina Götz; Nicole Wiedenmann; Tanja Schimek-Jasch; Francois Picaud; Charlotte Syrykh; Leonel V. Cagetti; Maria Jolnerovski; Yu Song 003; et al. (J. Biomed. Informatics, 2017)

Evolutionary multi-objective meta-optimization of deformation and tissue removal parameters improves the performance of deformable image registration of pre- and post-surgery images. - Kleopatra Pirpinia; Peter A. N. Bosman; Jan-Jakob Sonke; Marcel van Herk; Tanja Alderliesten (Image Processing, 2019)

Evolutionary Machine Learning for Multi-Objective Class Solutions in Medical Deformable Image Registration. - Kleopatra Pirpinia; Peter A. N. Bosman; Jan-Jakob Sonke; Marcel van Herk; Tanja Alderliesten (Algorithms, 2019)

Surrogate-free machine learning-based organ dose reconstruction for pediatric abdominal radiotherapy. - Marco Virgolin; Ziyuan Wang; Brian V. Balgobind; Irma W. E. M. van Dijk; Jan Wiersma; Petra S. Kroon; Geert O. R. Janssens; Marcel van Herk; D. C. Hodgson; L. Zadravec Zaletel; C. R. N. Rasch; Arjan Bel; et al. (CoRR, 2020)

Automatic Identification of Segmentation Errors for Radiotherapy Using Geometric Learning. - Edward G. A. Henderson; Andrew F. Green 001; Marcel van Herk; Eliana M. Vasquez Osorio (MICCAI (5), 2022)

Generalised Automatic Anatomy Finder (GAAF): A general framework for 3D location-finding in CT scans. - Edward G. A. Henderson; Eliana M. Vasquez Osorio; Marcel van Herk; Andrew F. Green 001 (CoRR, 2022)

The Impact of Training Dataset Size and Ensemble Inference Strategies on Head and Neck Auto-Segmentation. - Edward G. A. Henderson; Marcel van Herk; Eliana M. Vasquez Osorio (ISBI, 2023)

Fusion Contours as a Source of Segmentation Training Data: A Simulation Study. - Dónal M. McSweeney; Paul A. Bromiley; Andrew Green 001; Marcel van Herk; Alan McWilliam (ISBI, 2023)

Unsupervised Correspondence with Combined Geometric Learning and Imaging for Radiotherapy Applications. - Edward G. A. Henderson; Marcel van Herk; Andrew Green 001; Eliana M. Vasquez Osorio (ShapeMI@MICCAI, 2023)

An anatomically-informed correspondence initialisation method to improve learning-based registration for radiotherapy. - Edward G. A. Henderson; Marcel van Herk; Andrew F. Green 001; Eliana M. Vasquez Osorio (CoRR, 2025)