A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines. - Marcin Cieslik; Cameron Mura (BMC Bioinform., 2011)

Abstractions, Algorithms and Data Structures for Structural Bioinformatics in PyCogent. - Marcin Cieslik; Zygmunt Derewenda; Cameron Mura (CoRR, 2014)

PaPy: Parallel and Distributed Data-processing Pipelines in Python. - Marcin Cieslik; Cameron Mura (CoRR, 2014)

Genome-wide predictors of NF-κB recruitment and transcriptional activity. - Marcin Cieslik; Stefan Bekiranov (BioData Min., 2015)

Integrative clinical genomics of metastatic cancer. - Dan R. Robinson; Yi-Mi Wu; Robert J. Lonigro; Pankaj Vats; Erin Cobain; Jessica Everett; Xuhong Cao; Erica Rabban; Chandan Kumar-Sinha; Victoria Raymond; Scott Schuetze; Ajjai Alva; et al. (Nat., 2017)

A systematic overview of single-cell transcriptomics databases, their use cases, and limitations. - Mahnoor N. Gondal; Saad Ur Rehman Shah; Arul M. Chinnaiyan; Marcin Cieslik (Frontiers Bioinform., 2024)