mRNA: guanine-N7 cap methyltransferases: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships. - Janusz M. Bujnicki; Marcin Feder; Monika Radlinska; Leszek Rychlewski (BMC Bioinform., 2001)

Characterization of the cofactor-binding site in the SPOUT-fold methyltransferases by computational docking of S-adenosylmethionine to three crystal structures. - Michal A. Kurowski; Joanna M. Sasin; Marcin Feder; Janusz Debski; Janusz M. Bujnicki (BMC Bioinform., 2003)

The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function. - Jan Kosinski; Marcin Feder; Janusz M. Bujnicki (BMC Bioinform., 2005)

MODOMICS: a database of RNA modification pathways. - Stanislaw Dunin-Horkawicz; Anna Czerwoniec; Michal J. Gajda; Marcin Feder; Henri Grosjean; Janusz M. Bujnicki (Nucleic Acids Res., 2006)

Ligand-Optimized Homology Models of D1 and D2 Dopamine Receptors: Application for Virtual Screening. - Marcin Kolaczkowski; Adam Bucki; Marcin Feder; Maciej Pawlowski (J. Chem. Inf. Model., 2013)