Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information. - Marcio Luis Acencio; Ney Lemke (BMC Bioinform., 2009)

The development of an open-access database for human transcriptional regulation interactions. - Luiz A. Bovolenta; Marcio Luis Acencio; Ney Lemke (BMC Bioinform., 2011)

Construção e análise da rede integrada de interações entre genes humanos envolvida com a regulação da trnsição G1/S do ciclo celular plea adesão à matriz extracelular - Marcio Luis Acencio (2011)

GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks. - Esther Camilo; Luiz A. Bovolenta; Marcio Luis Acencio; José L. Rybarczyk Filho; Mauro A. A. Castro; José C. F. Moreira; Ney Lemke (Bioinform., 2013)

An ensemble framework for identifying essential proteins. - Xue Zhang 005; Wangxin Xiao; Marcio Luis Acencio; Ney Lemke; Xujing Wang (BMC Bioinform., 2016)

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. - Livia Perfetto; Marcio Luis Acencio; Glyn Bradley; Gianni Cesareni; Noemi del-Toro; Dávid Fazekas; Henning Hermjakob; Tamás Korcsmáros; Martin Kuiper; Astrid Lægreid; Prisca Lo Surdo; Ruth C. Lovering; et al. (Bioinform., 2019)

The Cytoscape BioGateway App: explorative network building from an RDF store. - Stian Holmås; Rafel Riudavets Puig; Marcio Luis Acencio; Vladimir Mironov; Martin Kuiper (Bioinform., 2020)

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). - Vasundra Touré; Steven Vercruysse; Marcio Luis Acencio; Ruth C. Lovering; Sandra E. Orchard; Glyn Bradley; Cristina Casals-Casas; Claudine Chaouiya; Noemi del-Toro; Åsmund Flobak; Pascale Gaudet; Henning Hermjakob; et al. (Bioinform., 2021)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)

A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance. - Alexander Mazein; Marcio Luis Acencio; Irina Balaur; Adrien Rougny; Danielle Welter; Anna Niarakis; Diana Ramirez Ardila; Ugur Dogrusoz; Piotr Gawron; Venkata P. Satagopam; Wei Gu; Andreas Kremer; et al. (Frontiers Bioinform., 2023)