FlexServ: an integrated tool for the analysis of protein flexibility. - Jordi Camps; Oliver Carrillo; Agustí Emperador; Laura Orellana; Adam Hospital; Manuel Rueda; Damjan Cicin-Sain; Marco D'Abramo; Josep Lluis Gelpí; Modesto Orozco (Bioinform., 2009)

Molecular basis of engineered meganuclease targeting of the endogenous human RAG1 locus. - Inés G. Muñoz; Jesús Prieto; Sunita Subramanian; Javier Coloma; Pilar Redondo; Maider Villate; Nekane Merino; Marco Marenchino; Marco D'Abramo; Francesco L. Gervasio; Sylvestre Grizot; Fayza Daboussi; et al. (Nucleic Acids Res., 2011)

Structure and dynamics of mesophilic variants from the homing endonuclease I-DmoI. - Josephine Alba; Maria Jose Marcaida; Jesús Prieto; Guillermo Montoya; Rafael Molina 002; Marco D'Abramo (J. Comput. Aided Mol. Des., 2017)

On the activation and deactivation pathways of the Lck kinase domain: a computational study. - Josephine Alba; Edoardo Milanetti; Marco D'Abramo (J. Comput. Aided Mol. Des., 2019)

Quantitative Characterization of Binding Pockets and Binding Complementarity by Means of Zernike Descriptors. - Lorenzo Di Rienzo; Edoardo Milanetti; Josephine Alba; Marco D'Abramo (J. Chem. Inf. Model., 2020)

Quaternary Structure Transitions of Human Hemoglobin: An Atomic-Level View of the Functional Intermediate States. - Nicole Balasco; Josephine Alba; Marco D'Abramo; Luigi Vitagliano (J. Chem. Inf. Model., 2021)

Atomic-Level View of the Functional Transition in Vertebrate Hemoglobins: The Case of Antarctic Fish Hbs. - Nicole Balasco; Antonella Paladino; Giuseppe Graziano; Marco D'Abramo; Luigi Vitagliano (J. Chem. Inf. Model., 2022)

Dissecting Methionine Oxidation by Hydrogen Peroxide in Proteins: Thermodynamics, Kinetics, and Susceptibility Descriptors. - Maria Laura De Sciscio; Fabio Centola; Simona Saporiti; Marco D'Abramo (J. Chem. Inf. Model., 2025)