Flow of Information during an Evolutionary Process: The Case of Influenza A Viruses. - Víctor Serrano-Solís; Marco V. José (Entropy, 2013)

Multivariate Entropy Characterizes the Gene Expression and Protein-Protein Networks in Four Types of Cancer. - Angel Juarez-Flores; Marco V. José (Entropy, 2018)

Symmetrical Properties of Graph Representations of Genetic Codes: From Genotype to Phenotype. - Marco V. José; Gabriel S. Zamudio (Symmetry, 2018)

The evolution of proteome: From the primeval to the very dawn of LUCA. - Miryam Palacios-Pérez; Marco V. José (Biosyst., 2019)

On the Importance of Asymmetry in the Phenotypic Expression of the Genetic Code upon the Molecular Evolution of Proteins. - Marco V. José; Gabriel S. Zamudio (Symmetry, 2020)

Information theory unveils the evolution of tRNA identity elements in the three domains of life. - Gabriel S. Zamudio; Miryam Palacios-Pérez; Marco V. José (Theory Biosci., 2020)

Is it possible that cells have had more than one origin? - Sávio Torres de Farias; Marco V. José; Francisco Prosdocimi (Biosyst., 2021)

From RNA to DNA: Insights about the transition of informational molecule in the biological systems based on the structural proximity between the polymerases. - Ariosvaldo Pereira dos Santos Junior; Marco V. José; Sávio Torres de Farias (Biosyst., 2021)

Prebiotic chemical refugia: multifaceted scenario for the formation of biomolecules in primitive Earth. - Francisco Prosdocimi; Sávio Torres de Farias; Marco V. José (Theory Biosci., 2022)

Evolutionary origin of B family DNA-dependent DNA polymerases from retrotranscriptases. - Sávio Torres de Farias; Ariadne Nobrega Marinho Furtado; Ariosvaldo Pereira dos Santos Junior; Marco V. José (Biosyst., 2023)

Decoding viruses: An alternative perspective on their history, origins and role in nature. - Francisco Prosdocimi; Juliana Reis Cortines; Marco V. José; Sávio Torres de Farias (Biosyst., 2023)

Symmetrical distributions of aminoacyl-tRNA synthetases during the evolution of the genetic code. - Marco V. José; Juan R. Bobadilla; Gabriel S. Zamudio; Sávio Torres de Farias (Theory Biosci., 2023)

From RNA to DNA: Emergence of reverse transcriptases from an ancestral RNA-dependent RNA polymerase. - Sávio Torres de Farias; Ana Karoline Nunes-Alves; Marco V. José (Biosyst., 2024)

Fragile X mental retardation protein modulates translation of proteins with predicted tendencies for liquid-liquid phase separation. - Omar Jurado; Marco V. José; Eugenio Frixione (Biosyst., 2025)