The Atlas of Physiology and Pathophysiology: Web-based multimedia enabled interactive simulations. - Jirí Kofránek; Stanislav Matousek; Jan Rusz; Petr Stodulka; Pavol Privitzer; Marek Matejak; Martin Tribula (Comput. Methods Programs Biomed., 2011)

Parameter estimation of complex mathematical models of human physiology using remote simulation distributed in scientific cloud. - Tomás Kulhánek; Marek Matejak; Jan Silar; Jirí Kofránek (BHI, 2014)

Modeling of short-term mechanism of arterial pressure control in the cardiovascular system: Object-oriented and acausal approach. - Tomás Kulhánek; Jirí Kofránek; Marek Matejak (Comput. Biol. Medicine, 2014)

Surviving sepsis - a 3D integrative educational simulator. - Filip Jezek; Martin Tribula; Tomás Kulhánek; Marek Matejak; Pavol Privitzer; Jan Silar; Jirí Kofránek; Lenka Lhotská (EMBC, 2015)

Experiences in teaching of modeling and simulation with emphasize on equation-based and acausal modeling techniques. - Tomás Kulhánek; Filip Jezek; Marek Matejak; Jan Silar; Jirí Kofránek (EMBC, 2015)

Physiomodel - an integrative physiology in Modelica. - Marek Matejak; Jirí Kofránek (EMBC, 2015)

Integrative physiology in Modelica. - Jirí Kofránek; Tomás Kulhánek; Marek Mateják; Filip Jezek; Jan Silar (Modelica, 2017)