YPDTM, PombePDTM and WormPDTM: model organism volumes of the BioKnowledgeTM Library, an integrated resource for protein information. - Maria C. Costanzo; Matthew E. Crawford; Jodi E. Hirschman; Janice E. Kranz; Philip Olsen; Laura S. Robertson; Marek S. Skrzypek; Burkhard R. Braun; Kelley Lennon-Hopkins; Pinar Kondu; Carey Lengieza; Jodi E. Lew-Smith; et al. (Nucleic Acids Res., 2001)

Analysis of Gene Ontology Features in Microarray Data Using the Proteome BioKnowledge® Library. - Robin J. Johnson; Jennifer M. Williams; Barbara M. Schreiber; Charles D. Elfe; Kelley Lennon-Hopkins; Marek S. Skrzypek; Renee D. White (Silico Biol., 2005)

The Candida Genome Database (CGD), a community resource for Candida albicans gene and protein information. - Martha B. Arnaud; Maria C. Costanzo; Marek S. Skrzypek; Gail Binkley; Christopher Lane; Stuart R. Miyasato; Gavin Sherlock (Nucleic Acids Res., 2005)

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD). - Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Kara Dolinski; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Robert S. Nash; Rose Oughtred; Marek S. Skrzypek; et al. (Nucleic Acids Res., 2005)

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome. - Jodi E. Hirschman; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Eurie L. Hong; Michael S. Livstone; Robert S. Nash; Julie Park; Rose Oughtred; et al. (Nucleic Acids Res., 2006)

Sequence resources at the Candida Genome Database. - Martha B. Arnaud; Maria C. Costanzo; Marek S. Skrzypek; Prachi Shah; Gail Binkley; Christopher Lane; Stuart R. Miyasato; Gavin Sherlock (Nucleic Acids Res., 2007)

Expanded protein information at SGD: new pages and proteome browser. - Robert S. Nash; Shuai Weng; Benjamin C. Hitz; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Michael S. Livstone; et al. (Nucleic Acids Res., 2007)

Gene Ontology annotations at SGD: new data sources and annotation methods. - Eurie L. Hong; Rama Balakrishnan; Qing Dong; Karen R. Christie; Julie Park; Gail Binkley; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; et al. (Nucleic Acids Res., 2008)

New mutant phenotype data curation system in the Saccharomyces Genome Database. - Maria C. Costanzo; Marek S. Skrzypek; Robert S. Nash; Edith D. Wong; Gail Binkley; Stacia R. Engel; Benjamin C. Hitz; Eurie L. Hong; J. Michael Cherry (Database J. Biol. Databases Curation, 2009)

The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community. - Martha B. Arnaud; Marcus C. Chibucos; Maria C. Costanzo; Jonathan Crabtree; Diane O. Inglis; Adil Lotia; Joshua Orvis; Prachi Shah; Marek S. Skrzypek; Gail Binkley; Stuart R. Miyasato; Jennifer R. Wortman; et al. (Nucleic Acids Res., 2010)

Saccharomyces Genome Database provides mutant phenotype data. - Stacia R. Engel; Rama Balakrishnan; Gail Binkley; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; Eurie L. Hong; Cynthia J. Krieger; Michael S. Livstone; et al. (Nucleic Acids Res., 2010)

New tools at the Candida Genome Database: biochemical pathways and full-text literature search. - Marek S. Skrzypek; Martha B. Arnaud; Maria C. Costanzo; Diane O. Inglis; Prachi Shah; Gail Binkley; Stuart R. Miyasato; Gavin Sherlock (Nucleic Acids Res., 2010)

Toward an interactive article: integrating journals and biological databases. - Arun Rangarajan; Tim Schedl; Karen Yook; Juancarlos Chan; Stephen Haenel; Lolly Otis; Sharon Faelten; Tracey DePellegrin-Connelly; Ruth Isaacson; Marek S. Skrzypek; J. Michael Cherry; Paul W. Sternberg; et al. (BMC Bioinform., 2011)

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources. - Martha B. Arnaud; Gustavo C. Cerqueira; Diane O. Inglis; Marek S. Skrzypek; Jonathan Binkley; Marcus C. Chibucos; Jonathan Crabtree; Clinton Howarth; Joshua Orvis; Prachi Shah; Farrell Wymore; Gail Binkley; et al. (Nucleic Acids Res., 2012)

Saccharomyces Genome Database: the genomics resource of budding yeast. - J. Michael Cherry; Eurie L. Hong; Craig Amundsen; Rama Balakrishnan; Gail Binkley; Esther T. Chan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; et al. (Nucleic Acids Res., 2012)

The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida glabrata. - Diane O. Inglis; Martha B. Arnaud; Jonathan Binkley; Prachi Shah; Marek S. Skrzypek; Farrell Wymore; Gail Binkley; Stuart R. Miyasato; Matt Simison; Gavin Sherlock (Nucleic Acids Res., 2012)

Curation accuracy of model organism databases. - Ingrid M. Keseler; Marek S. Skrzypek; Deepika Weerasinghe; Albert Y. Chen; Carol A. Fulcher; Gene-Wei Li; Kimberly C. Lemmer; Katherine M. Mladinich; Edmond D. Chow; Gavin Sherlock; Peter D. Karp (Database J. Biol. Databases Curation, 2014)

The Candida Genome Database: The new homology information page highlights protein similarity and phylogeny. - Jonathan Binkley; Martha B. Arnaud; Diane O. Inglis; Marek S. Skrzypek; Prachi Shah; Farrell Wymore; Gail Binkley; Stuart R. Miyasato; Matt Simison; Gavin Sherlock (Nucleic Acids Res., 2014)

The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. - Gustavo C. Cerqueira; Martha B. Arnaud; Diane O. Inglis; Marek S. Skrzypek; Gail Binkley; Matt Simison; Stuart R. Miyasato; Jonathan Binkley; Joshua Orvis; Prachi Shah; Farrell Wymore; Gavin Sherlock; et al. (Nucleic Acids Res., 2014)

The complex portal - an encyclopaedia of macromolecular complexes. - Birgit H. M. Meldal; Oscar Forner-Martinez; Maria C. Costanzo; Jose M. Dana; Janos Demeter; Marine Dumousseau; Selina S. Dwight; Anna Gaulton; Luana Licata; Anna N. Melidoni; Sylvie Ricard-Blum; Bernd Roechert; et al. (Nucleic Acids Res., 2015)

Integration of new alternative reference strain genome sequences into the Saccharomyces genome database. - Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Stacia R. Engel; Sage T. Hellerstedt; Kalpana Karra; Benjamin C. Hitz; Robert S. Nash; Kelley M. Paskov; et al. (Database J. Biol. Databases Curation, 2016)

The Saccharomyces Genome Database Variant Viewer. - Travis K. Sheppard; Benjamin C. Hitz; Stacia R. Engel; Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Sage T. Hellerstedt; Kalpana Karra; Robert S. Nash; et al. (Nucleic Acids Res., 2016)

Outreach and online training services at the Saccharomyces Genome Database. - Kevin A. MacPherson; Barry Starr; Edith D. Wong; Kyla S. Dalusag; Sage T. Hellerstedt; Olivia W. Lang; Robert S. Nash; Marek S. Skrzypek; Stacia R. Engel; J. Michael Cherry (Database J. Biol. Databases Curation, 2017)

The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data. - Marek S. Skrzypek; Jonathan Binkley; Gail Binkley; Stuart R. Miyasato; Matt Simison; Gavin Sherlock (Nucleic Acids Res., 2017)

Updated regulation curation model at the Saccharomyces Genome Database. - Stacia R. Engel; Marek S. Skrzypek; Sage T. Hellerstedt; Edith D. Wong; Robert S. Nash; Shuai Weng; Gail Binkley; Travis K. Sheppard; Kalpana Karra; J. Michael Cherry (Database J. Biol. Databases Curation, 2018)

Saccharomyces genome database informs human biology. - Marek S. Skrzypek; Robert S. Nash; Edith D. Wong; Kevin A. MacPherson; Sage T. Hellerstedt; Stacia R. Engel; Kalpana Karra; Shuai Weng; Travis K. Sheppard; Gail Binkley; Matt Simison; Stuart R. Miyasato; et al. (Nucleic Acids Res., 2018)

Integration of macromolecular complex data into the Saccharomyces Genome Database. - Edith D. Wong; Marek S. Skrzypek; Shuai Weng; Gail Binkley; Birgit H. M. Meldal; Livia Perfetto; Sandra E. Orchard; Stacia R. Engel; J. Michael Cherry; SGD Project (Database J. Biol. Databases Curation, 2019)

Alliance of Genome Resources Portal: unified model organism research platform. - Julie Agapite; Laurent-Philippe Albou; Suzi A. Aleksander; Joanna Argasinska; Valerio Arnaboldi; Helen Attrill; Susan M. Bello; Judith A. Blake; Olin Blodgett; Yvonne M. Bradford; Carol J. Bult; Scott Cain; et al. (Nucleic Acids Res., 2020)

Transcriptome visualization and data availability at the Saccharomyces Genome Database. - Patrick C. Ng; Edith D. Wong; Kevin A. MacPherson; Suzi A. Aleksander; Joanna Argasinska; Barbara Dunn; Robert S. Nash; Marek S. Skrzypek; Felix Gondwe; Sagar Jha; Kalpana Karra; Shuai Weng; et al. (Nucleic Acids Res., 2020)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)