SparkSeq: fast, scalable and cloud-ready tool for the interactive genomic data analysis with nucleotide precision. - Marek S. Wiewiórka; Antonio Messina; Alicja Pacholewska; Sergio Maffioletti; Piotr Gawrysiak; Michal J. Okoniewski (Bioinform., 2014)

Analysis of AmpliSeq RNA-Sequencing Enrichment Panels. - Marek S. Wiewiórka; Alicja Szabelska; Michal J. Okoniewski (PReMI, 2015)

Scalable Framework for the Analysis of Population Structure Using the Next Generation Sequencing Data. - Anastasiia Hryhorzhevska; Marek S. Wiewiórka; Michal J. Okoniewski; Tomasz Gambin (ISMIS, 2017)

Benchmarking distributed data warehouse solutions for storing genomic variant information. - Marek S. Wiewiórka; Dawid P. Wysakowicz; Michal J. Okoniewski; Tomasz Gambin (Database J. Biol. Databases Curation, 2017)

SeQuiLa: an elastic, fast and scalable SQL-oriented solution for processing and querying genomic intervals. - Marek S. Wiewiórka; Anna Lesniewska; Agnieszka Szmurlo; Kacper Stepien; Mateusz Borowiak; Michal J. Okoniewski; Tomasz Gambin (Bioinform., 2019)

Comparison of kNN and k-means optimization methods of reference set selection for improved CNV callers performance. - Wiktor Kusmirek; Agnieszka Szmurlo; Marek S. Wiewiórka; Robert M. Nowak; Tomasz Gambin (BMC Bioinform., 2019)

Cloud-native distributed genomic pileup operations. - Marek S. Wiewiórka; Agnieszka Szmurlo; Pawel Stankiewicz; Tomasz Gambin (Bioinform., 2023)