Constrained Multiple Sequence Alignment Tool Development and Its Application to RNase Family Alignment. - Chuan Yi Tang; Chin Lung Lu; Margaret Dah-Tsyr Chang; Yin-Te Tsai; Yuh-Ju Sun; Kun-Mao Chao; Jia-Ming Chang; Yu-Han Chiou; Chia-Mao Wu; Hao-Teng Chang; Wei-I Chou (CSB, 2002)

Constrained Multiple Sequence Alignment Tool Development Andits Application to Rnase Family Alignment. - Chuan Yi Tang; Chin Lung Lu; Margaret Dah-Tsyr Chang; Yin-Te Tsai; Yuh-Ju Sun; Kun-Mao Chao; Jia-Ming Chang; Yu-Han Chiou; Chia-Mao Wu; Hao-Teng Chang; Wei-I Chou (J. Bioinform. Comput. Biol., 2003)

Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences. - Tun-Wen Pai; Margaret Dah-Tsyr Chang; Jia-Han Chu; Wei-Yuan Chang; Hsiu Ling Tai (APBC, 2004)

Unique peptide prediction of RNase family sequences based on reinforced merging algorithms. - Hao-Teng Chang; Tan-Chi Fan; Margaret Dah-Tsyr Chang; Tun-Wen Pai; Bo-Han Su; Pei-Chih Wu (APBC, 2005)

A reinforced merging methodology for mapping unique peptide motifs in members of protein families. - Hao-Teng Chang; Tun-Wen Pai; Tan-Chi Fan; Bo-Han Su; Pei-Chih Wu; Chuan Yi Tang; Chun-Tien Chang; Shi-Hwei Liu; Margaret Dah-Tsyr Chang (BMC Bioinform., 2006)

Unique Peptide Identification of Rnasea Superfamily Sequences Based on Reinforced Merging Algorithms. - Tun-Wen Pai; Bo-Han Su; Pei-Chih Wu; Margaret Dah-Tsyr Chang; Hao-Teng Chang; Tan-Chi Fan; Shi-Hwei Liu (J. Bioinform. Comput. Biol., 2006)

REMUS: a tool for identification of unique peptide segments as epitopes. - Tun-Wen Pai; Margaret Dah-Tsyr Chang; Wen-Shyong Tzou; Bo-Han Su; Pei-Chih Wu; Hao-Teng Chang; Wei-I Chou (Nucleic Acids Res., 2006)

A Database for Prediction of Unique Peptide Motifs as Linear Epitopes. - Margaret Dah-Tsyr Chang; Hao-Teng Chang; Rong-Yuan Huang; Wen-Shyong Tzou; Chih-Hong Liu; Wei-Jun Zhung; Hsien-Wei Wang; Chun-Tien Chang; Tun-Wen Pai (ISBRA, 2007)

Biological Feature Incorporated Alignment for Cross Species Analysis on Carbohydrate Binding Modules. - Wei-Yao Chou; Shu-Chuan Lin; Rong-Yuan Huang; Ting-Ying Jiang; Chien-Jung Chen; Chia-Mao Wu; Chuan Yi Tang; Margaret Dah-Tsyr Chang; Wei-I Chou; Hao-Teng Chang (BIBM, 2009)

Prediction of Regulatory Molecules for Enhancement of EGFR Overexpression Triggered by Signal Peptide of Ribonuclease 3. - Hao-Teng Chang; Chung-Hsiao Chao; Yu-Fong Lin; Louis J. Tseng; Tun-Wen Pai; Tsan-Huang Shih; Margaret Dah-Tsyr Chang; Pei-Wen Tsai (CISIS, 2010)

Feature-incorporated alignment based ligand-binding residue prediction for carbohydrate-binding modules. - Wei-Yao Chou; Wei-I Chou; Tun-Wen Pai; Shu-Chuan Lin; Ting-Ying Jiang; Chuan Yi Tang; Margaret Dah-Tsyr Chang (Bioinform., 2010)

Inhibition of the interactions between eosinophil cationic protein and airway epithelial cells by traditional Chinese herbs. - Hao-Teng Chang; Louis J. Tseng; Ta-Jen Hung; Blacky T. Kao; Wei-Yong Lin; Tan-Chi Fan; Margaret Dah-Tsyr Chang; Tun-Wen Pai (BMC Syst. Biol., 2010)

Functional pathway mapping analysis for hypoxia-inducible factors. - Chia-Sheng Chuang; Tun-Wen Pai; Chin-Hua Hu; Wen-Shyong Tzou; Margaret Dah-Tsyr Chang; Hao-Teng Chang; Chih-Chia Chen (BMC Syst. Biol., 2011)

Molecular Identification of a Unique Heparin Binding Motif Derived from Human RNase3. - Ping-Hsueh Kuo; Chien-Jung Chen; Pei-Chun Lien; Hsiu-Hui Chang; Shun-lung Fang; Margaret Dah-Tsyr Chang; Tun-Wen Pai (CISIS, 2012)

In Silico Prediction and In Vitro Characterization of Unique Function of Human RNase3. - Pei-Chun Lien; Chien-Jung Chen; Ping-Hsueh Kuo; Tun-Wen Pai; Hsiu-Hui Chang; Yiu-Kay Lai; Wei-Shuo Wu; Margaret Dah-Tsyr Chang (CISIS, 2012)

RNA-seq coverage effects on biological pathways and GO tag clouds. - Chien-Ming Chen; Tsan-Huang Shih; Tun-Wen Pai; Zhen-Long Liu; Margaret Dah-Tsyr Chang (ISB, 2012)

Chemoattraction of macrophages by secretory molecules derived from cells expressing the signal peptide of eosinophil cationic protein. - Yushu Liu; Pei-Wen Tsai; Yong Wang; Tan-Chi Fan; Chia-Hung Hsieh; Margaret Dah-Tsyr Chang; Tun-Wen Pai; Chien-Fu Huang; Chung-Yu Lan; Hao-Teng Chang (BMC Syst. Biol., 2012)

In Vitro Characterization and in Vivo Application of a Dual Functional Peptide. - Chien-Jung Chen; Ping-Hsueh Kuo; Ta-Jen Hung; Shun-lung Fang; Che-Chuan Yang; Shieh-Yueh Yang; Margaret Dah-Tsyr Chang (CISIS, 2013)

Intelligent DNA methylation biomarker selection for colorectal cancer. - Yi-Hsuan Tsai; Lucy Yi-Hsuan Lai; Yun-Te Liao; Shu-Jen Chen; Tun-Wen Pai; Margaret Dah-Tsyr Chang (SMC, 2022)

Discovering Effective DNA Methylation Biomarkers through Different Gene Mutation Groups for Lung Cancer Detection. - Huan-Zhi Lin; Shi-Yan Huang; Tun-Wen Pai; Margaret Dah-Tsyr Chang; Lucy Yi-Hsuan Lai (ICCBB, 2024)