OnQ: An Authoring Tool for Dynamic Online Surveys. - Roy P. Pargas; James C. Witte; Laura Brand; Catherine Hochrine; Margaret Staton (ITCC, 2003)

GDR (Genome Database for Rosaceae): integrated web resources for Rosaceae genomics and genetics research. - Sook Jung; Christopher Jesudurai; Margaret Staton; Zhidian Du; Stephen P. Ficklin; Ilhyung Cho; Albert G. Abbott; Jeffrey Tomkins; Dorrie Main (BMC Bioinform., 2004)

GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data. - Sook Jung; Margaret Staton; Taein Lee; Anna Blenda; Randall Svancara; Albert G. Abbott; Dorrie Main (Nucleic Acids Res., 2008)

Tripal: a construction toolkit for online genome databases. - Stephen P. Ficklin; Lacey-Anne Sanderson; Chun-Huai Cheng; Margaret Staton; Taein Lee; Ilhyung Cho; Sook Jung; Kirstin E. Bett; Doreen Main (Database J. Biol. Databases Curation, 2011)

CartograTree: Enabling landscape genomics for forest trees. - Nic Herndon; Emily S. Grau; Iman Batra; Steven A. Demurjian; Hans A. Vasquez-Gross; Margaret E. Staton; Jill L. Wegrzyn (PeerJ Prepr., 2016)

New extension software modules to enhance searching and display of transcriptome data in Tripal databases. - Ming Chen; Nathan Henry; Abdullah Almsaeed; Xiao Zhou; Jill L. Wegrzyn; Stephen P. Ficklin; Margaret Staton (Database J. Biol. Databases Curation, 2017)

Tripal Developer Toolkit. - Bradford Condon; Abdullah Almsaeed; Ming Chen; Joe West; Margaret Staton (Database J. Biol. Databases Curation, 2018)

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. - Lisa C. Harper; Jacqueline D. Campbell; Ethalinda K. S. Cannon; Sook Jung; Monica Poelchau; Ramona L. Walls; Carson M. Andorf; Elizabeth Arnaud; Tanya Z. Berardini; Clayton L. Birkett; Steven B. Cannon; James D. Carson; et al. (Database J. Biol. Databases Curation, 2018)

Association Mapping for Forest Trees with CartograTree. - Nic Herndon; Taylor Falk; Emily S. Grau; Sook Jung; Stephen P. Ficklin; Dorrie Main; Margaret E. Staton; Jill L. Wegrzyn (Application of Semantic Technology in Biodiversity Science, 2018)

Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps. - Katheryn Buble; Sook Jung; Jodi L. Humann; Jing Yu 002; Chun-Huai Cheng; Taein Lee; Stephen P. Ficklin; Heidi Hough; Bradford Condon; Margaret E. Staton; Jill L. Wegrzyn; Dorrie Main (Database J. Biol. Databases Curation, 2019)

Growing and cultivating the forest genomics database, TreeGenes. - Taylor Falk; Nic Herndon; Emily S. Grau; Sean Buehler; Peter Richter 001; Sumaira Zaman; Eliza M. Baker; Risharde Ramnath; Stephen P. Ficklin; Margaret Staton; Frank Alex Feltus; Sook Jung; et al. (Database J. Biol. Databases Curation, 2019)

Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. - Shawna Spoor; Chun-Huai Cheng; Lacey-Anne Sanderson; Bradford Condon; Abdullah Almsaeed; Ming Chen; Anthony Bretaudeau; Helena Rasche; Sook Jung; Dorrie Main; Kirstin E. Bett; Margaret Staton; et al. (Database J. Biol. Databases Curation, 2019)

15 years of GDR: New data and functionality in the Genome Database for Rosaceae. - Sook Jung; Taein Lee; Chun-Huai Cheng; Katheryn Buble; Ping Zheng; Jing Yu 002; Jodi L. Humann; Stephen P. Ficklin; Ksenija Gasic; Kristin Scott; Morgan Frank; Sushan Ru; et al. (Nucleic Acids Res., 2019)

Tripal EUtils: a Tripal module to increase exchange and reuse of genome assembly metadata. - Bradford Condon; Abdullah Almsaeed; Sean Buehler; Christopher P. Childers; Stephen P. Ficklin; Margaret E. Staton; Monica Poelchau (Database J. Biol. Databases Curation, 2020)

Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. - Margaret Staton; Ethalinda Cannon; Lacey-Anne Sanderson; Jill L. Wegrzyn; Tavis K. Anderson; Sean Buehler; Irene Cobo-Simón; Kay Faaberg; Emily S. Grau; Valentin Guignon; Jessica Gunoskey; Blake Inderski; et al. (Briefings Bioinform., 2021)

Ten simple rules to ruin a collaborative environment. - Carolyn J. Lawrence-Dill; Robyn L. Allscheid; Albert Boaitey; Todd Bauman; Edward S. Buckler IV; Jennifer L. Clarke; Christopher Cullis; Jack Dekkers; Cassandra J. Dorius; Shawn F. Dorius; David Ertl; Matthew Homann; et al. (PLoS Comput. Biol., 2022)

Readsynth: short-read simulation for consideration of composition-biases in reduced metagenome sequencing approaches. - Ryan D. Kuster; Margaret Staton (BMC Bioinform., 2024)

A teaching and training framework to promote findable, accessible, interoperable, and reusable data generation in agriculture. - Annarita Marrano; Leyla Cabugos; Alenka Hafner; Beant Kapoor; John McNamara; Megan O'donnell; Leonore Reiser; Marcela Karey Tello-Ruiz; Huiting Zhang; Margaret Staton (Database J. Biol. Databases Curation, 2025)