Inferring Genetic Networks from Microarray Data. - Shawn Martin; George Davidson; Elebeoba E. May; Jean-Loup Faulon; Margaret Werner-Washburne (CSB, 2004)

Hyperspectral Imaging of Biological Targets: The Difference A High Resolution Spectral Dimension And Multivariate Analysis Can Make. - Jerilyn A. Timlin; David M. Haaland; Michael B. Sinclair; Monica Manginell; Susan Brozik; M. Juanita Martinez; Margaret Werner-Washburne; John Guzowski (ISBI, 2004)

A datamining approach to cell population deconvolution from gene expressions using particle filters. - Sushmita Roy; Terran Lane; Margaret Werner-Washburne (BIOKDD, 2005)

Multivariate curve resolution of time course microarray data. - Peter D. Wentzell; Tobias K. Karakach; Sushmita Roy; M. Juanita Martinez; Christopher P. Allen; Margaret Werner-Washburne (BMC Bioinform., 2006)

A Hidden-State Markov Model for Cell Population Deconvolution. - Sushmita Roy; Terran Lane; Christopher P. Allen; Anthony D. Aragon; Margaret Werner-Washburne (J. Comput. Biol., 2006)

Integrative Construction and Analysis of Condition-specific Biological Networks. - Sushmita Roy; Terran Lane; Margaret Werner-Washburne (AAAI, 2008)

A system for generating transcription regulatory networks with combinatorial control of transcription. - Sushmita Roy; Margaret Werner-Washburne; Terran Lane (Bioinform., 2008)

Learning structurally consistent undirected probabilistic graphical models. - Sushmita Roy; Terran Lane; Margaret Werner-Washburne (ICML, 2009)

Inference of Functional Networks of Condition-Specific Response–A Case Study Of Quiescence In Yeast. - Sushmita Roy; Terran Lane; Margaret Werner-Washburne; Diego Martínez (Pacific Symposium on Biocomputing, 2009)

A multiple network learning approach to capture system-wide condition-specific responses. - Sushmita Roy; Margaret Werner-Washburne; Terran Lane (Bioinform., 2011)