High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID). - Barry Zeeberg; Haiying Qin; Sudarshan Narasimhan; Margot Sunshine; Hong Cao; David W. Kane; Mark Reimers; Robert M. Stephens; David Bryant; Stanley K. Burt; Eldad Elnekave; Danielle M. Hari; et al. (BMC Bioinform., 2005)

AbMiner: A bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic, and immunologic studies. - Sylvia M. Major; Satoshi Nishizuka; Daisaku Morita; Rick Rowland; Margot Sunshine; Uma T. Shankavaram; Frank Washburn; Daniel Asin; Hosein Kouros-Mehr; David W. Kane; John N. Weinstein (BMC Bioinform., 2006)

CellMiner: A Database Tool for the NCI-60 Cancer Cell Lines. - Uma T. Shankavaram; Sudhir Varma; David W. Kane; Margot Sunshine; Krishna Chary; William C. Reinhold; John N. Weinstein (BIOCOMP, 2008)

PathVisio-MIM: PathVisio plugin for creating and editing Molecular Interaction Maps (MIMs). - Augustin Luna; Margot Sunshine; Martijn P. van Iersel; Mirit I. Aladjem; Kurt W. Kohn (Bioinform., 2011)

A Formal MIM Specification and Tools for the Common Exchange of MIM Diagrams: an XML-Based Format, an API, and a Validation Method. - Augustin Luna; Evrim I. Karac; Margot Sunshine; Lucas Chang; Ruth Nussinov; Mirit I. Aladjem; Kurt W. Kohn (BMC Bioinform., 2011)