DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways. - Ioannis S. Vlachos; Nikos Kostoulas; Thanasis Vergoulis; Georgios K. Georgakilas; Martin Reczko; Manolis Maragkakis; Maria D. Paraskevopoulou; Kostantinos Prionidis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2012)

DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. - Maria D. Paraskevopoulou; Georgios K. Georgakilas; Nikos Kostoulas; Martin Reczko; Manolis Maragkakis; Theodore M. Dalamagas; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2013)

DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows. - Maria D. Paraskevopoulou; Georgios K. Georgakilas; Nikos Kostoulas; Ioannis S. Vlachos; Thanasis Vergoulis; Martin Reczko; Christos Filippidis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2013)

BiDaS: a web-based Monte Carlo BioData Simulator based on sequence/feature characteristics. - Maria D. Paraskevopoulou; Ioannis S. Vlachos; Emmanouil Athanasiadis; George M. Spyrou (Nucleic Acids Res., 2013)

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA: mRNA interactions. - Ioannis S. Vlachos; Maria D. Paraskevopoulou; Dimitra Karagkouni; Georgios K. Georgakilas; Thanasis Vergoulis; Ilias Kanellos; Ioannis-Laertis Anastasopoulos; Sofia Maniou; Konstantina Karathanou; Despina Kalfakakou; Athanasios Fevgas; Theodore Dalamagas 001; et al. (Nucleic Acids Res., 2015)

DIANA-miRPath v3.0: deciphering microRNA function with experimental support. - Ioannis S. Vlachos; Konstantinos Zagganas; Maria D. Paraskevopoulou; Georgios K. Georgakilas; Dimitra Karagkouni; Thanasis Vergoulis; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2015)

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. - Georgios K. Georgakilas; Ioannis S. Vlachos; Konstantinos Zagganas; Thanasis Vergoulis; Maria D. Paraskevopoulou; Ilias Kanellos; Panayiotis Tsanakas; Dimitris Dellis; Athanasios Fevgas; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts. - Maria D. Paraskevopoulou; Ioannis S. Vlachos; Dimitra Karagkouni; Georgios K. Georgakilas; Ilias Kanellos; Thanasis Vergoulis; Konstantinos Zagganas; Panayiotis Tsanakas; Evangelos Floros; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data. - Ioannis S. Vlachos; Thanasis Vergoulis; Maria D. Paraskevopoulou; Filopoimin Lykokanellos; Georgios K. Georgakilas; Penny Georgiou; Serafeim Chatzopoulos; Dimitra Karagkouni; Foteini Christodoulou; Theodore Dalamagas 001; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2016)

BUFET: boosting the unbiased miRNA functional enrichment analysis using bitsets. - Konstantinos Zagganas; Thanasis Vergoulis; Maria D. Paraskevopoulou; Ioannis S. Vlachos; Spiros Skiadopoulos; Theodore Dalamagas 001 (BMC Bioinform., 2017)

DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions. - Dimitra Karagkouni; Maria D. Paraskevopoulou; Serafeim Chatzopoulos; Ioannis S. Vlachos; Spyros Tastsoglou; Ilias Kanellos; Dimitris Papadimitriou; Ioannis Kavakiotis; Sofia Maniou; Giorgos Skoufos; Thanasis Vergoulis; Theodore Dalamagas 001; et al. (Nucleic Acids Res., 2018)

DIANA-LncBase v3: indexing experimentally supported miRNA targets on non-coding transcripts. - Dimitra Karagkouni; Maria D. Paraskevopoulou; Spyros Tastsoglou; Giorgos Skoufos; Anna Karavangeli; Vasileios Pierros; Elissavet Zacharopoulou; Artemis G. Hatzigeorgiou (Nucleic Acids Res., 2020)

microT-CNN: an avant-garde deep convolutional neural network unravels functional miRNA targets beyond canonical sites. - Elissavet Zacharopoulou; Maria D. Paraskevopoulou; Spyros Tastsoglou; Athanasios Alexiou; Anna Karavangeli; Vasileios Pierros; Stefanos Digenis; Galatea Mavromati; Artemis G. Hatzigeorgiou; Dimitra Karagkouni (Briefings Bioinform., 2024)