Bayesian model selection maps for group studies. - Maria João Duarte Rosa; Sven Bestmann; Lee M. Harrison; Will D. Penny (NeuroImage, 2010)

Estimating the transfer function from neuronal activity to BOLD using simultaneous EEG-fMRI. - Maria João Duarte Rosa; James Kilner; Felix Blankenburg; Oliver Josephs; Will D. Penny (NeuroImage, 2010)

Comparing Families of Dynamic Causal Models. - Will D. Penny; Klaas E. Stephan; Jean Daunizeau; Maria João Duarte Rosa; Karl J. Friston; Thomas M. Schofield; Alexander P. Leff (PLoS Comput. Biol., 2010)

Bayesian Comparison of Neurovascular Coupling Models Using EEG-fMRI. - Maria João Duarte Rosa; James Kilner; Will D. Penny (PLoS Comput. Biol., 2011)

Development and application of model selection methods for investigating brain function. - Maria João Duarte Rosa (2012)

Sparse Network-Based Models for Patient Classification Using fMRI. - Maria João Duarte Rosa; Liana Catarina Lima Portugal; John Shawe-Taylor; Janaina Mourão Miranda (PRNI, 2013)

Connectivity-based neurofeedback: Dynamic causal modeling for real-time fMRI. - Yury Koush; Maria João Duarte Rosa; Fabien Robineau; Klaartje Heinen; Sebastian W. Rieger; Nikolaus Weiskopf; Patrik Vuilleumier; Dimitri Van De Ville; Frank Scharnowski (NeuroImage, 2013)

PRoNTo: Pattern Recognition for Neuroimaging Toolbox. - Jessica Schrouff; Maria João Duarte Rosa; Jane M. Rondina; Andre F. Marquand; Carlton Chu; John Ashburner; Christophe Phillips; Jonas Richiardi; Janaina Mourão Miranda (Neuroinformatics, 2013)

Full Bayesian multi-task learning for multi-output brain decoding and accommodating missing data. - Andre F. Marquand; Steven C. R. Williams; Orla M. Doyle; Maria João Duarte Rosa (PRNI, 2014)

Sparse network-based models for patient classification using fMRI. - Maria João Duarte Rosa; Liana Catarina Lima Portugal; Tim Hahn; Andreas J. Fallgatter; Marta I. Garrido; John Shawe-Taylor; Janaina Mourão Miranda (NeuroImage, 2015)

Sparse PLS hyper-parameters optimisation for investigating brain-behaviour relationships. - Fabio S. Ferreira; Maria João Duarte Rosa; Michael Moutoussis; Ray Dolan; John Shawe-Taylor; John Ashburner; Janaina Mourão Miranda (PRNI, 2018)

Embedding Anatomical or Functional Knowledge in Whole-Brain Multiple Kernel Learning Models. - Jessica Schrouff; João M. Monteiro; Liana Catarina Lima Portugal; Maria João Duarte Rosa; Christophe Phillips; Janaina Mourão Miranda (Neuroinformatics, 2018)