Self-organization and missing values in SOM and GTM. - Tommi Vatanen; Maria Osmala; Tapani Raiko; Krista Lagus; Marko Sysi-Aho; Matej Oresic; Timo Honkela; Harri Lähdesmäki (Neurocomputing, 2015)

Bayesian metabolic flux analysis reveals intracellular flux couplings. - Markus Heinonen; Maria Osmala; Henrik Mannerström; Janne Wallenius; Samuel Kaski; Juho Rousu; Harri Lähdesmäki (Bioinform., 2019)

Enhancer prediction in the human genome by probabilistic modelling of the chromatin feature patterns. - Maria Osmala; Harri Lähdesmäki (BMC Bioinform., 2020)

ChromDMM: a Dirichlet-multinomial mixture model for clustering heterogeneous epigenetic data. - Maria Osmala; Gökcen Eraslan; Harri Lähdesmäki (Bioinform., 2022)