A new network representation of the metabolism to detect chemical transformation modules. - Maria Sorokina; Claudine Médigue; David Vallenet (BMC Bioinform., 2015)

NaPLeS: a natural products likeness scorer - web application and database. - Maria Sorokina; Christoph Steinbeck (J. Cheminformatics, 2019)

Too sweet: cheminformatics for deglycosylation in natural products. - Jonas Schaub; Achim Zielesny; Christoph Steinbeck; Maria Sorokina (J. Cheminformatics, 2020)

Review on natural products databases: where to find data in 2020. - Maria Sorokina; Christoph Steinbeck (J. Cheminformatics, 2020)

Computational Applications in Secondary Metabolite Discovery (CAiSMD): an online workshop. - Fidele Ntie-Kang; Kiran K. Telukunta; Serge A. T. Fobofou; Victor Chukwudi Osamor; Samuel A. Egieyeh; Marilia Valli; Yannick Djoumbou Feunang; Maria Sorokina; Conrad Stork; Neann Mathai; Paul F. Zierep; Ana L. Chávez-Hernández; et al. (J. Cheminformatics, 2021)

DECIMER-Segmentation: Automated extraction of chemical structure depictions from scientific literature. - Kohulan Rajan; Henning Otto Brinkhaus; Maria Sorokina; Achim Zielesny; Christoph Steinbeck (J. Cheminformatics, 2021)

COCONUT online: Collection of Open Natural Products database. - Maria Sorokina; Peter Merseburger; Kohulan Rajan; Mehmet Aziz Yirik; Christoph Steinbeck (J. Cheminformatics, 2021)

MAYGEN: an open-source chemical structure generator for constitutional isomers based on the orderly generation principle. - Mehmet Aziz Yirik; Maria Sorokina; Christoph Steinbeck (J. Cheminformatics, 2021)

Toward a Framework for Integrative, FAIR, and Reproducible Management of Data on the Dynamic Balance of Microbial Communities. - Luiz M. R. Gadelha Jr.; Martin Hohmuth; Mahnoor Zulfiqar; David Schöne; Sheeba Samuel; Maria Sorokina; Christoph Steinbeck; Birgitta König-Ries (e-Science, 2022)

MAW: the reproducible Metabolome Annotation Workflow for untargeted tandem mass spectrometry. - Mahnoor Zulfiqar; Luiz M. R. Gadelha Jr.; Christoph Steinbeck; Maria Sorokina; Kristian Peters (J. Cheminformatics, 2023)