Transmission Rates and Performance of a Network of Computers. - Krzysztof Boryczko; Marian Bubak; M. Gajecki; Jacek Kitowski; Jacek Moscinski; Marek Pogoda (HPCN, 1994)

Lattice Gas Automata and Molecular Dynamics on a Network of Computers. - Krzysztof Boryczko; Marian Bubak; Jacek Kitowski; Jacek Moscinski; Renata Slota (HPCN, 1994)

Parallel Distributed 2-D Short-Range Molecular Dynamics on Networked Workstations. - Marian Bubak; Jacek Moscinski; Marek Pogoda; W. Zdechlikiewicz (PARA, 1994)

Implementation of Parallel Lattice Gas Program on Workstations under PVM. - Marian Bubak; Jacek Moscinski; Renata Slota (PARA, 1994)

Load balancing for lattice gas and molecular dynamics simulations on networked workstations. - Marian Bubak; Jacek Moscinski; Marek Pogoda; Renata Slota (HPCN Europe, 1995)

2-D Cellular Automata and Short Range Molecular Dynamics Programs for Simulations on Networked Workstations and Parallel Computers. - Marian Bubak (PARA, 1995)

Pablo-Based Performance Monitoring Tool for PVM Applications. - Marian Bubak; Wlodzimierz Funika; Jacek Moscinski; Dariusz Tasak (PARA, 1995)

Linear Algebra Computation on Parallel Machines. - Marian Bubak; Wojciech Owczarz; Jerzy Wasniewski (PARA, 1995)

Distributed 2-D Molecular Dynamics Simulation on Networked Workstations and Multiprocessors. - Marian Bubak; Jacek Moscinski; Marek Pogoda (HPCN Europe, 1996)

Parallel Object-Oriented Library of Genetic Algorithms. - Marian Bubak; Waldemar Ciesla; Krzysztof Sowa (PARA, 1996)

Monitoring of Performance of PVM Applications on Virtual Network Computer. - Marian Bubak; Wlodzimierz Funika; Jacek Moscinski (PARA, 1996)

Object-Oriented Library of Parallel Genetic Algorithms and Its Implementation on Networked Workstations and HP/Convex Exemplar. - Marian Bubak; Waldemar Ciesla; Krzysztof Sowa (HPCN Europe, 1997)

Performance Analysis Environment for Parallel Applications on Networked Worstations. - Marian Bubak; Wlodzimierz Funika; Jacek Moscinski (HPCN Europe, 1997)

Parallel FEM Simulation of Forging Processes on Workstations and HP/Convex Exemplar. - R. Chrobak; Marian Bubak; Jacek Kitowski; Jacek Moscinski (HPCN Europe, 1997)

Evaluation of Parallel Application's Behavior in Message Passing Environment. - Marian Bubak; Wlodzimierz Funika; Jacek Moscinski (PVM/MPI, 1997)

Tuning the Performance of Parallel Programs on NOWs Using Performance Analysis Tool. - Marian Bubak; Wlodzimierz Funika; Jacek Moscinski (PARA, 1998)

On-Line Performance Monitoring Using OMIS. - Marian Bubak; Wlodzimierz Funika; Kamil Iskra; Radoslaw Maruszewski (PVM/MPI, 1998)

Porting CHAOS Library to MPI. - Marian Bubak; Piotr Luszczek; Agnieszka Wierzbowska (PVM/MPI, 1998)

Enhancing OCM to Support MPI Applications. - Marian Bubak; Wlodzimierz Funika; Radoslaw Gembarowski; Pawel Hodurek; Roland Wismüller (HPCN Europe, 1999)

OCM-Based Tools for Performance Monitoring of Message Passing Applications. - Marian Bubak; Wlodzimierz Funika; Kamil Iskra; Radoslaw Maruszewski (HPCN Europe, 1999)

Symbol Table Management in an HPF Debugger. - Marian Bubak; Wlodzimierz Funika; Grzegorz Mlynarczyk; Krzysztof Sowa; Roland Wismüller (HPCN Europe, 1999)

Design of High-Performance C++ Package for Handling of Multidimensional Histograms. - Marian Bubak; Jakub T. Moscicki; Jamie Shiers (HPCN Europe, 1999)

Computer Simulation of Ageing with an Extended Penna Model. - Andrzej Zbigniew Maksymowicz; Marian Bubak; Katarzyna Zajac 001; M. Magdón (HPCN Europe, 1999)

Enhancing the Functionality of Performance Measurement Tools for Message Passing Environments. - Marian Bubak; Wlodzimierz Funika; Kamil Iskra; Radoslaw Maruszewski; Roland Wismüller (PVM/MPI, 1999)

Towards Portable Runtime Support for Irregular and Out-of-Core Computations. - Marian Bubak; Piotr Luszczek (PVM/MPI, 1999)

A Versatile Support for Binding Native Code to Java. - Marian Bubak; Dawid Kurzyniec; Piotr Luszczek (HPCN Europe, 2000)

Performance Measurement Support for MPI Applications with PATOP. - Marian Bubak; Wlodzimierz Funika; Bartosz Balis; Roland Wismüller (PARA, 2000)

Hydra - Decentralized and Adaptative Approach to Distributed Computing. - Marian Bubak; Pawel Plaszczak (PARA, 2000)

Interoperability of OCM-Based On-Line Tools. - Marian Bubak; Wlodzimierz Funika; Bartosz Balis; Roland Wismüller (PVM/MPI, 2000)

Advanced Library Support for Irregular and Out-of-Core Parallel Computing. - Peter Brezany; Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (HPCN Europe, 2001)

On-Line Tool Support for Parallel Applications. - Marian Bubak; Wlodzimierz Funika; Bartosz Balis; Roland Wismüller (HPCN Europe, 2001)

Migratable Sockets for Dynamic Load Balancing. - Marian Bubak; Dariusz Zbik; G. Dick van Albada; Kamil Iskra; Peter M. A. Sloot (HPCN Europe, 2001)

Irregular and Out-of-Core Parallel Computing on Clusters. - Peter Brezany; Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (PPAM, 2001)

A Concept of Grid Application Monitoring. - Marian Bubak; Wlodzimierz Funika; Bartosz Balis; Roland Wismüller (PPAM, 2001)

Towards a Monitoring Interface Specification for Distributed Java Applications. - Marian Bubak; Wlodzimierz Funika; Piotr Metel; Rafal Orlowski; Roland Wismüller (PPAM, 2001)

Biological Time Scale and Ageing in the Penna Model. - Maria Stanislawa Magdon-Maksymowicz; Marian Bubak; Andrzej Zbigniew Maksymowicz (PPAM, 2001)

High-performance computing and networking enables complex applications. - Hamideh Afsarmanesh; Marian Bubak (Future Gener. Comput. Syst., 2001)

Convenient use of legacy software in Java with Janet package. - Marian Bubak; Dawid Kurzyniec; Piotr Luszczek (Future Gener. Comput. Syst., 2001)

Creating Java to Native Code Interfaces with Janet. - Marian Bubak; Dawid Kurzyniec; Piotr Luszczek; Vaidy S. Sunderam (Sci. Program., 2001)

Portable library of migratable sockets. - Marian Bubak; Dariusz Zbik; G. Dick van Albada; Kamil Iskra; Peter M. A. Sloot (Sci. Program., 2001)

Support Tools and Environments. - Marian Bubak; Thomas Ludwig 002 (Euro-Par, 2002)

A Concept of Portable Monitoring of Multithreaded Programs. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller (International Conference on Computational Science (2), 2002)

Large-Scale Scientific Irregular Computing on Clusters and Grids. - Peter Brezany; Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (International Conference on Computational Science (1), 2002)

Monitoring System for Distributed Java Applications. - Marian Bubak; Wlodzimierz Funika; Piotr Metel; Rafal Orlowski; Roland Wismüller (International Conference on Computational Science (2), 2002)

An Infrastructure for Grid Application Monitoring. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Tomasz Szepieniec; Roland Wismüller (PVM/MPI, 2002)

The CrossGrid Performance Analysis Tool for Interactive Grid Applications. - Marian Bubak; Wlodzimierz Funika; Roland Wismüller (PVM/MPI, 2002)

Towards the CrossGrid Architecture. - Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (PVM/MPI, 2002)

CrossGrid and Its Relatives in Europe. - Marian Bubak; Michal Turala (PVM/MPI, 2002)

SPiDER - An advanced symbolic debugger for Fortran 90/HPF programs. - Thomas Fahringer; Krzysztof Sowa-Pieklo; Przemyslaw Czerwinski; Peter Brezany; Marian Bubak; Rainer Koppler; Roland Wismüller (Concurr. Comput. Pract. Exp., 2002)

The Polder Computing Environment: a system for interactive distributed simulation. - Kamil Iskra; Robert G. Belleman; G. Dick van Albada; J. Santoso; Peter M. A. Sloot; Henri E. Bal; Hans J. W. Spoelder; Marian Bubak (Concurr. Comput. Pract. Exp., 2002)

Towards a Grid Management System for HLA-Based Interactive Simulations. - Katarzyna Zajac 001; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (DS-RT, 2003)

Monitoring Grid Applications with Grid-Enabled OMIS Monitor. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Tomasz Szepieniec; Roland Wismüller; Marcin Radecki (European Across Grids Conference, 2003)

The G-PM Tool for Grid-Oriented Performance Analysis. - Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Tomasz Arodz; Marcin Kurdziel (European Across Grids Conference, 2003)

The CrossGrid Architecture: Applications, Tools, and Grid Services. - Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (European Across Grids Conference, 2003)

An Overview of European Grid Projects. - Marian Bubak; Piotr Nowakowski; Robert Pajak (European Across Grids Conference, 2003)

Grid Services for HLA-Based Distributed Simulation Frameworks. - Katarzyna Zajac 001; Alfredo Tirado-Ramos; Zhiming Zhao; Peter M. A. Sloot; Marian Bubak (European Across Grids Conference, 2003)

Monitoring and Performance Analysis of Grid Applications. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Tomasz Szepieniec; Roland Wismüller (International Conference on Computational Science, 2003)

Architecture of the Grid for Interactive Applications. - Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (International Conference on Computational Science, 2003)

Experimental Grid Access for Dynamic Discovery and Data Transfer in Distributed Interactive Simulation Systems. - Alfredo Tirado-Ramos; Katarzyna Zajac 001; Zhiming Zhao; Peter M. A. Sloot; G. Dick van Albada; Marian Bubak (International Conference on Computational Science, 2003)

Monitoring Threaded Application with Thread-Enabled OMIS Monitor. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Grzegorz Kaplita (PPAM, 2003)

Security in the OCM-G Grid Application Monitoring System. - Bartosz Balis; Marian Bubak; Wojciech Rzasa; Tomasz Szepieniec; Roland Wismüller (PPAM, 2003)

Event Handling in the J-OCM Monitoring System. - Marian Bubak; Wlodzimierz Funika; Marcin Smetek; Zbigniew Kilianski; Roland Wismüller (PPAM, 2003)

Request Processing in the Java-Oriented OMIS Compliant Monitoring System. - Marian Bubak; Wlodzimierz Funika; Marcin Smetek; Zbigniew Kilianski; Roland Wismüller (PPAM, 2003)

Automatic Flow Building for Component Grid Applications. - Marian Bubak; Kamil Górka; Tomasz Gubala; Maciej Malawski; Katarzyna Zajac 001 (PPAM, 2003)

Grid Architecture for Interactive Applications. - Marian Bubak; Maciej Malawski; Katarzyna Zajac 001 (PPAM, 2003)

Execution and Migration Management of HLA-Based Interactive Simulations on the Grid. - Katarzyna Zajac 001; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (PPAM, 2003)

TOM - Efficient Monitoring Infrastructure for Multithreaded Programs. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Grzegorz Kaplita (PVM/MPI, 2003)

Architecture of Monitoring System for Distributed Java Applications. - Marian Bubak; Wlodzimierz Funika; Marcin Smetek; Zbigniew Kilianski; Roland Wismüller (PVM/MPI, 2003)

Component-Based System for Grid Application Workflow Composition. - Marian Bubak; Kamil Górka; Tomasz Gubala; Maciej Malawski; Katarzyna Zajac 001 (PVM/MPI, 2003)

A monitoring system for multithreaded applications. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller (Future Gener. Comput. Syst., 2003)

Monitoring of distributed Java applications. - Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Piotr Metel; Rafal Orlowski (Future Gener. Comput. Syst., 2003)

An interactive Grid for non-invasive vascular reconstruction. - Peter M. A. Sloot; Alfredo Tirado-Ramos; Alfons G. Hoekstra; Marian Bubak (CCGRID, 2004)

Monitoring of HLA Grid Application Federates with OCM-G. - Katarzyna Rycerz; Bartosz Balis; Robert Szymacha; Marian Bubak; Peter M. A. Sloot (DS-RT, 2004)

Application Monitoring in CrossGrid and Other Grid Projects. - Bartosz Balis; Marian Bubak; Marcin Radecki; Tomasz Szepieniec; Roland Wismüller (European Across Grids Conference, 2004)

Software Engineering in the EU CrossGrid Project. - Marian Bubak; Maciej Malawski; Grzegorz Mlynarczyk; Piotr Nowakowski; Robert Pajak; Katarzyna Rycerz; Michal Turala (European Across Grids Conference, 2004)

Lhcmaster - A System for Storage and Analysis of Data Coming from the ATLAS Simulations. - Maciej Malawski; Marek Wieczorek; Marian Bubak; Elzbieta Richter-Was (European Across Grids Conference, 2004)

Support for User-Defined Metrics in the Online Performance Analysis Tool G-PM. - Roland Wismüller; Marian Bubak; Wlodzimierz Funika; Tomasz Arodz; Marcin Kurdziel (European Across Grids Conference, 2004)

Efficiency of the GSI Secured Network Transmission. - Bartosz Balis; Marian Bubak; Wojciech Rzasa; Tomasz Szepieniec (International Conference on Computational Science, 2004)

Adaptation of Legacy Software to Grid Services. - Bartosz Balis; Marian Bubak; Michal Wegiel (International Conference on Computational Science, 2004)

Grid Service Registry for Workflow Composition Framework. - Marian Bubak; Tomasz Gubala; Michal Kapalka; Maciej Malawski; Katarzyna Rycerz (International Conference on Computational Science, 2004)

Monitoring System for Distributed Java Applications. - Wlodzimierz Funika; Marian Bubak; Marcin Smetek (International Conference on Computational Science, 2004)

Support for Effective and Fault Tolerant Execution of HLA-Based Applications in the OGSA Framework. - Katarzyna Rycerz; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (International Conference on Computational Science, 2004)

Performance Measurement Model in the G-PM Tool. - Roland Wismüller; Marian Bubak; Wlodzimierz Funika; Tomasz Arodz; Marcin Kurdziel (International Conference on Computational Science, 2004)

Performance Evaluation and Monitoring of Interactive Grid Applications. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Marcin Radecki; Tomasz Szepieniec; Tomasz Arodz; Marcin Kurdziel (PVM/MPI, 2004)

Tools and Services for Interactive Applications on the Grid - The CrossGrid Tutorial. - Tomasz Szepieniec; Marcin Radecki; Katarzyna Rycerz; Marian Bubak; Maciej Malawski (PVM/MPI, 2004)

A Performance Analysis Tool for Interactive Applications on the Grid. - Roland Wismüller; Marian Bubak; Wlodzimierz Funika; Bartosz Balis (Int. J. High Perform. Comput. Appl., 2004)

An integrative approach to high-performance biomedical problem solving environments on the Grid. - Alfredo Tirado-Ramos; Peter M. A. Sloot; Alfons G. Hoekstra; Marian Bubak (Parallel Comput., 2004)

Grid environment for on-line application monitoring and performance analysis. - Bartosz Balis; Marian Bubak; Wlodzimierz Funika; Roland Wismüller; Marcin Radecki; Tomasz Szepieniec; Tomasz Arodz; Marcin Kurdziel (Sci. Program., 2004)

Towards the Performance Visualization of Web-Service Based Applications. - Marian Bubak; Wlodzimierz Funika; Marcin Koch; Dominik Dziok; Allen D. Malony; Marcin Smetek; Roland Wismüller (PPAM, 2005)

GridSpace - Semantic Programming Environment for the Grid. - Tomasz Gubala; Marian Bubak (PPAM, 2005)

Semantic-Based Grid Workflow Composition. - Tomasz Gubala; Marian Bubak; Maciej Malawski; Katarzyna Rycerz (PPAM, 2005)

Enabling Remote Method Invocations in Peer-to-Peer Environments: RMIX over JXTA. - Pawel Jurczyk; Maciej Golenia; Maciej Malawski; Dawid Kurzyniec; Marian Bubak; Vaidy S. Sunderam (PPAM, 2005)

A Grid Service for Management of Multiple HLA Federate Processes. - Katarzyna Rycerz; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (PPAM, 2005)

Towards Distributed Monitoring and Performance Analysis Services in the K-WfGrid Project. - Hong Linh Truong 001; Bartosz Balis; Marian Bubak; Jakub Dziwisz; Thomas Fahringer; Andreas Hoheisel (PPAM, 2005)

Workflow composer and service registry for grid applications. - Marian Bubak; Tomasz Gubala; Michal Kapalka; Maciej Malawski; Katarzyna Rycerz (Future Gener. Comput. Syst., 2005)

A Framework for HLA-Based Interactive Simulations on the Grid. - Katarzyna Rycerz; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (Simul., 2005)

Performance monitoring of GRID superscalar with OCM-G/G-PM: integration issues. - Rosa M. Badia; Raül Sirvent; Marian Bubak; Wlodzimierz Funika; Piotr Machner (CoreGRID Integration Workshop, 2006)

Problem Solving Environment for Distributed Interactive Applications. - Katarzyna Rycerz; Marian Bubak; Peter M. A. Sloot; Vladimir Getov (CoreGRID Integration Workshop, 2006)

Towards User-Defined Performance Monitoring of Distributed Java Applications. - Wlodzimierz Funika; Piotr Godowski; Piotr Pegiel; Marian Bubak (e-Science, 2006)

Semantic Composition of Scientific Workflows Based on the Petri Nets Formalism. - Tomasz Gubala; Daniel Harezlak; Marian Bubak; Maciej Malawski (e-Science, 2006)

Grid Support for HLA-Based Collaborative Environment for Vascular Reconstruction. - Katarzyna Rycerz; Marian Bubak; Maciej Malawski; Peter M. A. Sloot (e-Science, 2006)

K-WfGrid Distributed Monitoring and Performance Analysis Services for Workflows in the Grid. - Hong Linh Truong 001; Peter Brunner; Thomas Fahringer; Francesco Nerieri; Robert Samborski; Bartosz Balis; Marian Bubak; Kuba Rozkwitalski (e-Science, 2006)

Fine-Grained Instrumentation and Monitoring of Legacy Applications in a Service-Oriented Environment. - Bartosz Balis; Marian Bubak; Krzysztof Guzy (International Conference on Computational Science (2), 2006)

An Instrumentation Infrastructure for Grid Workflow Applications. - Bartosz Balis; Hong Linh Truong 001; Marian Bubak; Thomas Fahringer; Krzysztof Guzy; Kuba Rozkwitalski (OTM Conferences (2), 2006)

From Molecule to Man: Decision Support in Individualized E-Health. - Peter M. A. Sloot; Alfredo Tirado-Ramos; Ilkay Altintas; Marian Bubak; Charles A. Boucher (Computer, 2006)

Grid-Based Interactive Decision Support in Biomedicine. - Alfredo Tirado-Ramos; Peter M. A. Sloot; Marian Bubak (Grid Computing for Bioinformatics and Computational Biology, 2007)

Performance monitoring of GRID superscalar with OCM-G/G-PM: improvements. - Rosa M. Badia; Raül Sirvent; Marian Bubak; Wlodzimierz Funika; Piotr Machner (CoreGRID Workshop - Making Grids Work, 2007)

Interoperability of Grid component models: GCM and CCA case study. - Maciej Malawski; Marian Bubak; Françoise Baude; Denis Caromel; Ludovic Henrio; Matthieu Morel (CoreGRID, 2007)

High-Level Scripting Approach for Building Component-Based Applications on the Grid. - Maciej Malawski; Tomasz Gubala; Marek Kasztelnik; Tomasz Bartynski; Marian Bubak; Françoise Baude; Ludovic Henrio (CoreGRID Workshop - Making Grids Work, 2007)

From Monitoring Data to Experiment Information - Monitoring of Grid Scientific Workflows. - Bartosz Balis; Marian Bubak; Michal Pelczar (eScience, 2007)

User-Oriented Querying over Repositories of Data and Provenance. - Bartosz Balis; Marian Bubak; Jakub Wach (eScience, 2007)

Efficient and Reliable Execution of Legacy Codes Exposed as Services. - Bartosz Balis; Marian Bubak; Kamil Sterna; Adam Bemben (International Conference on Computational Science (1), 2007)

Provenance Tracking in the ViroLab Virtual Laboratory. - Bartosz Balis; Marian Bubak; Jakub Wach (PPAM, 2007)

Universal Grid Client: Grid Operation Invoker. - Tomasz Bartynski; Maciej Malawski; Tomasz Gubala; Marian Bubak (PPAM, 2007)

Using HLA and Grid for Distributed Multiscale Simulations. - Katarzyna Rycerz; Marian Bubak; Peter M. A. Sloot (PPAM, 2007)

Overhead Verification for Cryptographically Secured Transmission on the Grid. - Wojciech Rzasa; Marian Bubak; Bartosz Balis; Tomasz Szepieniec (Comput. Artif. Intell., 2007)

Towards Distributed Petascale Computing - Alfons G. Hoekstra; Simon Portegies Zwart; Marian Bubak; Peter M. A. Sloot (CoRR, 2007)

Regular Paper: Interactive N-Body Simulations On the Grid: HLA Versus MPI. - Katarzyna Rycerz; Alfredo Tirado-Ramos; Alessia Gualandris; Simon Portegies Zwart; Marian Bubak; Peter M. A. Sloot (Int. J. High Perform. Comput. Appl., 2007)

Virtual Laboratory for Development and Execution of Biomedical Collaborative Applications. - Marian Bubak; Tomasz Gubala; Maciej Malawski; Bartosz Balis; Wlodzimierz Funika; Tomasz Bartynski; Eryk Ciepiela; Daniel Harezlak; Marek Kasztelnik; Joanna Kocot; Dariusz Król 002; Piotr Nowakowski; et al. (CBMS, 2008)

Provenance Tracking and Querying in the ViroLab Virtual Laboratory. - Bartosz Balis; Marian Bubak; Michal Pelczar; Jakub Wach (CCGRID, 2008)

A New Approach to Development and Execution of Interactive Applications on the Grid. - Piotr Nowakowski; Daniel Harezlak; Marian Bubak (CCGRID, 2008)

A Framework for Interactive Parameter Sweep Applications. - Adianto Wibisono; Zhiming Zhao; Adam Belloum; Marian Bubak (CCGRID, 2008)

Performance Monitoring of GRID superscalar: Summing up. - Wlodzimierz Funika; Piotr Machner; Marian Bubak; Rosa M. Badia; Raül Sirvent (CoreGRID Workshop on Grid Middleware, 2008)

Performance Visualization Of Grid Applications Based On OCM-G And Paraver. - Wlodzimierz Funika; Maciej Zientarski; Rosa M. Badia; Jesús Labarta; Marian Bubak (CoreGRID Integration Workshop, 2008)

Support for Cooperative Experiments in VL-e: From Scientific Workflows to Knowledge Sharing. - Zhiming Zhao; Adam Belloum; Marian Bubak; Bob Hertzberger (eScience, 2008)

Real-Time Performance Support for Complex Grid Applications. - Marian Bubak; Wlodzimierz Funika; Bartosz Balis; Tomasz Szepieniec; Krzysztof Guzy; Roland Wismüller (Euro-Par Workshops, 2008)

A P2P Approach to Resource Discovery in On-Line Monitoring of Grid Workflows. - Bartlomiej Labno; Marian Bubak; Bartosz Balis (Euro-Par, 2008)

Investigation of the DAG eligible jobs maximization algorithm in a grid. - Tomasz Szepieniec; Marian Bubak (GRID, 2008)

Multi-Science Decision Support for HIV Drug Resistance Treatment. - Peter M. A. Sloot; Peter V. Coveney; Marian Bubak; Anne-Mieke Vandamme; Breanndán Ó Nualláin; David A. van de Vijver; Charles A. Boucher (HealthGrid, 2008)

Building Collaborative Applications for System-level Science. - Marian Bubak; Tomasz Gubala; Marek Kasztelnik; Maciej Malawski (High Performance Computing Workshop, 2008)

Integrating and Accessing Medical Data Resources within the ViroLab Virtual Laboratory. - Matthias Assel; Piotr Nowakowski; Marian Bubak (ICCS (3), 2008)

Provenance Querying for End-Users: A Drug Resistance Case Study. - Bartosz Balis; Marian Bubak; Michal Pelczar; Jakub Wach (ICCS (3), 2008)

International Workshop on Applications of Workflows in Computational Science (AWCS 08). - Adam Belloum; Zhiming Zhao; Marian Bubak (ICCS (3), 2008)

Environment for Collaborative Development and Execution of Virtual Laboratory Applications. - Wlodzimierz Funika; Daniel Harezlak; Dariusz Król 002; Marian Bubak (ICCS (3), 2008)

Towards a System-Level Science Support. - Tomasz Gubala; Marek Kasztelnik; Maciej Malawski; Marian Bubak (ICCS (1), 2008)

An Event-Based Approach to Reducing Coupling in Large-Scale Applications. - Bartosz Kowalewski; Marian Bubak; Bartosz Balis (ICCS (3), 2008)

A Tool for Building Collaborative Applications by Invocation of Grid Operations. - Maciej Malawski; Tomasz Bartynski; Marian Bubak (ICCS (3), 2008)

Dynamic Interactions in HLA Component Model for Multiscale Simulations. - Katarzyna Rycerz; Marian Bubak; Peter M. A. Sloot (ICCS (2), 2008)

Evaluation of Eligible Jobs Maximization Algorithm for DAG Scheduling in Grids. - Tomasz Szepieniec; Marian Bubak (ICCS (1), 2008)

An Ontology Model for Execution Records of Grid Scientific Applications. - Bartosz Balis; Marian Bubak (SKG, 2008)

LGF: A flexible framework for exposing legacy codes as services. - Bartosz Balis; Marian Bubak; Michal Wegiel (Future Gener. Comput. Syst., 2008)

High-level application-specific performance analysis using the G-PM tool. - Roland Wismüller; Marian Bubak; Wlodzimierz Funika (Future Gener. Comput. Syst., 2008)

Monitoring of Grid scientific workflows. - Bartosz Balis; Marian Bubak; Bartlomiej Labno (Sci. Program., 2008)

ViroLab Security and Virtual Organization Infrastructure. - Jan Meizner; Maciej Malawski; Eryk Ciepiela; Marek Kasztelnik; Daniel Harezlak; Piotr Nowakowski; Dariusz Król 002; Tomasz Gubala; Wlodzimierz Funika; Marian Bubak; Tomasz Mikolajczyk; Pawel Plaszczak; et al. (APPT, 2009)

CompTalks - From a Meta-model Towards a Framework for Application-Level Interaction Protocols. - Eryk Ciepiela; Maciej Malawski; Marian Bubak (Euro-Par Workshops, 2009)

Introduction. - Thomas Fahringer; Alexandru Iosup; Marian Bubak; Matei Ripeanu; Xian-He Sun; Hong Linh Truong 001 (Euro-Par, 2009)

A Collaborative Environment Allowing Clinical Investigations on Integrated Biomedical Databases. - Matthias Assel; David A. van de Vijver; Pieter Libin; Kristof Theys; Daniel Harezlak; Breanndán Ó Nualláin; Piotr Nowakowski; Marian Bubak; Anne-Mieke Vandamme; Stijn Imbrechts; Raphael Sangeda; Tao Jiang; et al. (HealthGrid, 2009)

Providing security for MOCCA component environment. - Michal Dyrda; Maciej Malawski; Marian Bubak; Syed Naqvi (IPDPS, 2009)

Leveraging Complex Event Processing for Grid Monitoring. - Bartosz Balis; Bartosz Kowalewski; Marian Bubak (PPAM (2), 2009)

Special section on workflow systems and applications in e-Science. - Zhiming Zhao; Adam Belloum; Marian Bubak (Future Gener. Comput. Syst., 2009)

Towards Role-Based Self-healing in Autonomous Monitoring Systems. - Wlodzimierz Funika; Piotr Pegiel; Marian Bubak; Jacek Kitowski (CISIS, 2010)

Actor-Driven Workflow Execution in Distributed Environments. - Frank Berretz; Sascha Skorupa; Volker Sander; Adam Belloum; Marian Bubak (Euro-Par Workshops, 2010)

Flexible and Secure Access to Computing Clusters. - Jan Meizner; Maciej Malawski; Marian Bubak (Comput. Sci., 2010)

The PL-Grid Virtual Laboratory for the Life Sciences Domain. - Maciej Malawski; Eryk Ciepiela; Tomasz Gubala; Piotr Nowakowski; Daniel Harezlak; Marek Kasztelnik; Joanna Kocot; Tomasz Bartynski; Marian Bubak (Bio Algorithms Med Syst., 2010)

Invocation of operations from script-based Grid applications. - Maciej Malawski; Tomasz Bartynski; Marian Bubak (Future Gener. Comput. Syst., 2010)

Perspectives on grid computing. - Uwe Schwiegelshohn; Rosa M. Badia; Marian Bubak; Marco Danelutto; Schahram Dustdar; Fabrizio Gagliardi; Alfred Geiger; Ladislav Hluchý; Dieter Kranzlmüller; Erwin Laure; Thierry Priol; Alexander Reinefeld; et al. (Future Gener. Comput. Syst., 2010)

Dynamic Handling for Cooperating Scientific Web Services. - Reginald Cushing; Spiros Koulouzis; Adam Belloum; Marian Bubak (eScience, 2011)

Comparison of Cloud and Local HPC Approach for MUSCLE-based Multiscale Simulations. - Katarzyna Rycerz; Marcin Nowak; Pawel Pierzchala; Eryk Ciepiela; Daniel Harezlak; Marian Bubak (e-Science Workshops, 2011)

On-Line Monitoring of Service-Level Agreements in the Grid. - Bartosz Balis; Renata Slota; Jacek Kitowski; Marian Bubak (Euro-Par Workshops (2), 2011)

Service Level Management for Executable Papers. - Reginald Cushing; Spiros Koulouzis; Rudolf J. Strijkers; Adam Belloum; Marian Bubak (Euro-Par Workshops (2), 2011)

Prediction-based auto-scaling of scientific workflows. - Reginald Cushing; Spiros Koulouzis; Adam S. Z. Belloum; Marian Bubak (MGC, 2011)

On-Line Grid Monitoring Based on Distributed Query Processing. - Bartosz Balis; Grzegorz Dyk; Marian Bubak (PPAM (2), 2011)

Polish Computational Research Space for International Scientific Collaborations. - Jacek Kitowski; Michal Turala; Kazimierz Wiatr; Lukasz Dutka; Marian Bubak; Tomasz Szepieniec; Marcin Radecki; Mariusz Sterzel; Zofia Mosurska; Robert Pajak; Renata Slota; Krzysztof Kurowski; et al. (PPAM (1), 2011)

Component Approach to Distributed Multiscale Simulations. - Katarzyna Rycerz; Marian Bubak (SIMULTECH, 2011)

Grid Resource Registry - Abstract Layer for Computational Resources. - Marek Kasztelnik; Marian Bubak (Comput. Sci., 2011)

Real-time Grid monitoring based on complex event processing. - Bartosz Balis; Bartosz Kowalewski; Marian Bubak (Future Gener. Comput. Syst., 2011)

Processing moldable tasks on the grid: Late job binding with lightweight user-level overlay. - Jakub T. Moscicki; Massimo Lamanna; Marian Bubak; Peter M. A. Sloot (Future Gener. Comput. Syst., 2011)

Collaborative e-Science Experiments and Scientific Workflows. - Adam Belloum; Márcia A. Inda; Dmitry Vasunin; Vladimir Korkhov; Zhiming Zhao; Han Rauwerda; Timo M. Breit; Marian Bubak; Louis O. Hertzberger (IEEE Internet Comput., 2011)

The UrbanFlood Common Information Space for Early Warning Systems. - Bartosz Balis; Marek Kasztelnik; Marian Bubak; Tomasz Bartynski; Tomasz Gubala; Piotr Nowakowski; Jeroen Broekhuijsen (ICCS, 2011)

Quilt: Interactive Publications. - Marian Bubak; Piotr Nowakowski; Eryk Ciepiela (FET, 2011)

Flood early warning system: design, implementation and computational modules. - Valeria V. Krzhizhanovskaya; G. S. Shirshov; Natalia B. Melnikova; Robert G. Belleman; F. I. Rusadi; B. J. Broekhuijsen; B. P. Gouldby; J. Lhomme; Bartosz Balis; Marian Bubak; Alexander L. Pyayt; Ilya I. Mokhov; et al. (ICCS, 2011)

Component Approach to Computational Applications on Clouds. - Maciej Malawski; Jan Meizner; Marian Bubak; Pawel Gepner (ICCS, 2011)

Managing Entire Lifecycles of e-Science Applications in the GridSpace2 Virtual Laboratory - From Motivation through Idea to Operable Web-Accessible Environment Built on Top of PL-Grid e-Infrastructure. - Eryk Ciepiela; Piotr Nowakowski; Joanna Kocot; Daniel Harezlak; Tomasz Gubala; Jan Meizner; Marek Kasztelnik; Tomasz Bartynski; Maciej Malawski; Marian Bubak (PL-Grid, 2012)

Scripting Language Extensions Offered by the GridSpace Experiment Platform. - Daniel Harezlak; Marek Kasztelnik; Eryk Ciepiela; Marian Bubak (PL-Grid, 2012)

Examining Protein Folding Process Simulation and Searching for Common Structure Motifs in a Protein Family as Experiments in the GridSpace2 Virtual Laboratory. - Tomasz Jadczyk; Maciej Malawski; Marian Bubak; Irena Roterman (PL-Grid, 2012)

Flexible and Extendable Mechanism Enabling Secure Access to e-Infrastructures and Storage of Confidential Data for the GridSpace2 Virtual Laboratory. - Jan Meizner; Eryk Ciepiela; Piotr Nowakowski; Joanna Kocot; Maciej Malawski; Marian Bubak (PL-Grid, 2012)

Implementation of Service Level Management in PL-Grid Infrastructure. - Tomasz Szepieniec; Malgorzata Tomanek; Marcin Radecki; Magda Szopa; Marian Bubak (PL-Grid, 2012)

Computations of Protein Hydrophobicity Profile as Virtual Experiment in Gridspace Virtual Laboratory. - Eryk Ciepiela; Tomasz Jadczyk; Daniel Harezlak; Marek Kasztelnik; Piotr Nowakowski; Grzegorz Dyk; Maciej Malawski; Marian Bubak; Irena Roterman (Bio Algorithms Med Syst., 2012)

Component-based approach for programming and running scientific applications on grids and clouds. - Maciej Malawski; Tomasz Gubala; Marian Bubak (Int. J. High Perform. Comput. Appl., 2012)

Enabling Web Services to Consume and Produce Large Datasets. - Spiros Koulouzis; Reginald Cushing; Konstantinos A. Karasavvas; Adam Belloum; Marian Bubak (IEEE Internet Comput., 2012)

A Distributed Multiscale Computation of a Tightly Coupled Model Using the Multiscale Modeling Language. - Joris Borgdorff; Carles Bona-Casas; Mariusz Mamonski; Krzysztof Kurowski; Tomasz Piontek; Bartosz Bosak; Katarzyna Rycerz; Eryk Ciepiela; Tomasz Gubala; Daniel Harezlak; Marian Bubak; Eric Lorenz; et al. (ICCS, 2012)

Constructing workflows from script applications. - Mikolaj Baranowski; Adam Belloum; Marian Bubak; Maciej Malawski (Sci. Program., 2012)

A Cloud-Based Framework for Collaborative Data Management in the VPH-Share Project. - Siegfried Benkner; Chris Borckholder; Marian Bubak; Yuriy Kaniovskyi; Richard Knight; Martin Koehler; Spiros Koulouzis; Piotr Nowakowski; Steven Wood (AINA Workshops, 2013)

A Development and Execution Environment for Early Warning Systems for Natural Disasters. - Bartosz Balis; Tomasz Bartynski; Marian Bubak; Grzegorz Dyk; Tomasz Gubala; Marek Kasztelnik (CCGRID, 2013)

Evaluation of Cloud Providers for VPH Applications. - Marian Bubak; Marek Kasztelnik; Maciej Malawski; Jan Meizner; Piotr Nowakowski; Susheel Varma (CCGRID, 2013)

Beyond Scientific Workflows: Networked Open Processes. - Reginald Cushing; Marian Bubak; Adam Belloum; Cees de Laat (e-Science, 2013)

Cloud Data Federation for Scientific Applications. - Spiros Koulouzis; Dmitry Vasyunin; Reginald Cushing; Adam Belloum; Marian Bubak (Euro-Par Workshops, 2013)

MapReduce Operations with WS-VLAM Workflow Management System. - Mikolaj Baranowski; Adam Belloum; Marian Bubak (ICCS, 2013)

The Collage Authoring Environment: From Proof-of-Concept Prototype to Pilot Service. - Eryk Ciepiela; Daniel Harezlak; Marek Kasztelnik; Jan Meizner; Grzegorz Dyk; Piotr Nowakowski; Marian Bubak (ICCS, 2013)

Support for Multiscale Simulations with Molecular Dynamics. - Katarzyna Rycerz; Eryk Ciepiela; Grzegorz Dyk; Derek Groen; Tomasz Gubala; Daniel Harezlak; Maciej Pawlik; James J. Suter; Stefan J. Zasada; Peter V. Coveney; Marian Bubak (ICCS, 2013)

A Secure and Flexible Data Infrastructure for the VPH-Share Community. - Siegfried Benkner; Yuriy Kaniovskyi; Chris Borckholder; Marian Bubak; Piotr Nowakowski; Dario Ruiz Lopez; Steven Wood (PDCAT, 2013)

Domain-Driven Visual Query Formulation over RDF Data Sets. - Bartosz Balis; Tomasz Grabiec; Marian Bubak (PPAM (1), 2013)

Cost Optimization of Execution of Multi-level Deadline-Constrained Scientific Workflows on Clouds. - Maciej Malawski; Kamil Figiela; Marian Bubak; Ewa Deelman; Jarek Nabrzyski (PPAM (1), 2013)

Secure Storage and Processing of Confidential Data on Public Clouds. - Jan Meizner; Marian Bubak; Maciej Malawski; Piotr Nowakowski (PPAM (1), 2013)

Enhancing VLAM Workflow Model with MapReduce Operations. - Mikolaj Baranowski; Adam Belloum; Marian Bubak (SIMULTECH, 2013)

Semantic Integration for Model-based Life Science Applications. - Tomasz Gubala; Katarzyna Prymula; Piotr Nowakowski; Marian Bubak (SIMULTECH, 2013)

Distributed Computing on an Ensemble of Browsers. - Reginald Cushing; Ganeshwara Herawan Hananda Putra; Spiros Koulouzis; Adam Belloum; Marian Bubak; Cees de Laat (IEEE Internet Comput., 2013)

How to Use Google App Engine for Free Computing. - Maciej Malawski; Maciej Kuzniar; Piotr Wójcik; Marian Bubak (IEEE Internet Comput., 2013)

OIntEd: online ontology instance editor enabling a new approach to ontology development. - Adianto Wibisono; Ralph Koning; Paola Grosso; Adam Belloum; Marian Bubak; Cees de Laat (Softw. Pract. Exp., 2013)

Towards Provisioning of Reproducible, Reviewable and Reusable In-Silico Experiments with the GridSpace2 Platform. - Eryk Ciepiela; Bartosz Wilk; Daniel Harezlak; Marek Kasztelnik; Maciej Pawlik; Marian Bubak (PL-Grid, 2014)

A Lightweight Method of Metadata and Data Management with DataNet. - Daniel Harezlak; Marek Kasztelnik; Maciej Pawlik; Bartosz Wilk; Marian Bubak (PL-Grid, 2014)

Enabling Multiscale Fusion Simulations on Distributed Computing Resources. - Katarzyna Rycerz; Marian Bubak; Eryk Ciepiela; Maciej Pawlik; Olivier Hoenen; Daniel Harezlak; Bartosz Wilk; Tomasz Gubala; Jan Meizner; David Coster (PL-Grid, 2014)

Automata-Based Dynamic Data Processing for Clouds. - Reginald Cushing; Adam Belloum; Marian Bubak; Cees de Laat (Euro-Par Workshops (1), 2014)

High Performance Computations for Decision Support in Critical Situations: Introduction to the Third Workshop on Urgent Computing. - Alexander Boukhanovsky; Marian Bubak (ICCS, 2014)

Generating Scientific Documentation for Computational Experiments Using Provenance. - Adianto Wibisono; Peter Bloem; Gerben Klaas Dirk de Vries; Paul Groth; Adam Belloum; Marian Bubak (IPAW, 2014)

Applying workflow as a service paradigm to application farming. - Reginald Cushing; Spiros Koulouzis; Adam Belloum; Marian Bubak (Concurr. Comput. Pract. Exp., 2014)

Execution Management and Efficient Resource Provisioning for Flood Decision Support. - Bartosz Balis; Marek Kasztelnik; Maciej Malawski; Piotr Nowakowski; Bartosz Wilk; Maciej Pawlik; Marian Bubak (ICCS, 2015)

Teaching Quantum Computing with the QuIDE Simulator. - Katarzyna Rycerz; Joanna Patrzyk; Bartlomiej Patrzyk; Marian Bubak (ICCS, 2015)

Cookery: A framework for developing cloud applications. - Mikolaj Baranowski; Adam Belloum; Marian Bubak (HPCS, 2015)

Data and process abstractions for cloud computing. - Mikolaj Baranowski; Marian Bubak; Adam Belloum (HPCS, 2015)

A Lightweight Approach for Deployment of Scientific Workflows in Cloud Infrastructures. - Bartosz Balis; Kamil Figiela; Maciej Malawski; Maciej Pawlik; Marian Bubak (PPAM (1), 2015)

Using Akka Actors for Managing Iterations in Multiscale Applications. - Katarzyna Rycerz; Marian Bubak (PPAM (1), 2015)

Support for Scientific Workflows in a Model-Based Cloud Platform. - Maciej Malawski; Bartosz Balis; Kamil Figiela; Maciej Pawlik; Marian Bubak (UCC, 2015)

Towards A Novel Environment for Simulation of Quantum Computing. - Joanna Patrzyk; Bartlomiej Patrzyk; Katarzyna Rycerz; Marian Bubak (Comput. Sci., 2015)

Composing, execution and sharing of multiscale applications. - Katarzyna Rycerz; Marian Bubak; Eryk Ciepiela; Daniel Harezlak; Tomasz Gubala; Jan Meizner; Maciej Pawlik; Bartosz Wilk (Future Gener. Comput. Syst., 2015)

Scheduling Multilevel Deadline-Constrained Scientific Workflows on Clouds Based on Cost Optimization. - Maciej Malawski; Kamil Figiela; Marian Bubak; Ewa Deelman; Jarek Nabrzyski (Sci. Program., 2015)

Towards a data processing plane: An automata-based distributed dynamic data processing model. - Reginald Cushing; Adam Belloum; Marian Bubak; Cees de Laat (Future Gener. Comput. Syst., 2016)

SDN-aware federation of distributed data. - Spiros Koulouzis; Adam S. Z. Belloum; Marian Bubak; Zhiming Zhao; Miroslav Zivkovic; Cees T. A. M. de Laat (Future Gener. Comput. Syst., 2016)

Distributed Data Management Service for VPH Applications. - Spiros Koulouzis; Adam Belloum; Marian Bubak; Pablo Lamata; Daniel Nolte; Dmitry Vasyunin; Cees de Laat (IEEE Internet Comput., 2016)

Smart levee monitoring and flood decision support system: reference architecture and urgent computing management. - Bartosz Balis; Tomasz Bartynski; Marian Bubak; Daniel Harezlak; Marek Kasztelnik; Maciej Malawski; Piotr Nowakowski; Maciej Pawlik; Bartosz Wilk (ICCS, 2017)

Towards an operational database for real-time environmental monitoring and early warning systems. - Bartosz Balis; Marian Bubak; Daniel Harezlak; Piotr Nowakowski; Maciej Pawlik; Bartosz Wilk (ICCS, 2017)

Bridging the Gap Between HPC and Cloud Using HyperFlow and PaaSage. - Dennis Hoppe; Yosandra Sandoval; Anthony Sulistio; Maciej Malawski; Bartosz Balis; Maciej Pawlik; Kamil Figiela; Dariusz Król 002; Michal Orzechowski; Jacek Kitowski; Marian Bubak (PPAM (1), 2017)

Support for Taverna workflows in the VPH-Share cloud platform. - Marek Kasztelnik; Ernesto Coto; Marian Bubak; Maciej Malawski; Piotr Nowakowski; Juan Arenas; Alfredo Saglimbeni; Debora Testi; Alejandro F. Frangi (Comput. Methods Programs Biomed., 2017)

Exascale computing and data architectures for brownfield applications. - Martin Bobák 001; Adam S. Z. Belloum; Piotr Nowakowski; Jan Meizner; Marian Bubak; Matti Heikkurinen; Ondrej Habala; Ladislav Hluchý (ICNC-FSKD, 2018)

Holistic approach to management of IT infrastructure for environmental monitoring and decision support systems with urgent computing capabilities. - Bartosz Balis; Robert Brzoza-Woch; Marian Bubak; Marek Kasztelnik; Bartosz Kwolek; Piotr Nawrocki; Piotr Nowakowski; Tomasz Szydlo; Krzysztof Zielinski (Future Gener. Comput. Syst., 2018)

Urgent computing for decision support in critical situations. - Alexander V. Boukhanovsky; Valeria V. Krzhizhanovskaya; Marian Bubak (Future Gener. Comput. Syst., 2018)

Cloud computing infrastructure for the VPH community. - Piotr Nowakowski; Marian Bubak; Tomasz Bartynski; Tomasz Gubala; Daniel Harezlak; Marek Kasztelnik; Maciej Malawski; Jan Meizner (J. Comput. Sci., 2018)

Application of Continuous Time Quantum Walks to Image Segmentation. - Michal Krok; Katarzyna Rycerz; Marian Bubak (ICCS (2), 2019)

Seamlessly Managing HPC Workloads Through Kubernetes. - Sergio López-Huguet; J. Damian Segrelles Quilis; Marek Kasztelnik; Marian Bubak; Ignacio Blanquer (ISC Workshops, 2020)

Towards Exascale Computing Architecture and Its Prototype: Services and Infrastructure. - Jan Meizner; Piotr Nowakowski; Jan Kapala; Patryk Wojtowicz; Marian Bubak; Viet D. Tran; Martin Bobák 001; Maximilian Höb (Comput. Informatics, 2020)

New approach to allocation planning of many-task workflows on clouds. - Michael Gerhards; Volker Sander; Miroslav Zivkovic; Adam Belloum; Marian Bubak (Concurr. Comput. Pract. Exp., 2020)

Preface to the Special Issue on Software Engineering. - Marian Bubak; Maciej Malawski; Renata G. Slota (Comput. Informatics, 2021)

Container-Based Platform for Computational Medicine. - Gennaro Junior Pezzullo; Beniamino Di Martino; Marian Bubak (AINA (3), 2022)

Digital Twin Simulation Development and Execution on HPC Infrastructures. - Marek Kasztelnik; Piotr Nowakowski; Jan Meizner; Maciej Malawski; Adam Nowak; Krzysztof Gadek; Karol Zajac; Antonino Amedeo La Mattina; Marian Bubak (ICCS (2), 2023)