A dynamic programming algorithm for identification of triplex-forming sequences. - Matej Lexa; Tomás Martínek; Ivana Burgetova; Daniel Kopecek; Marie Brázdová (Bioinform., 2011)

Prediction of Significant Cruciform Structures from Sequence in Topologically Constrained DNA - A Probabilistic Modelling Approach. - Matej Lexa; Lucie Navrátilová; Karel Nejedlý; Marie Brázdová (BIOINFORMATICS, 2012)

Uneven Distribution of Potential Triplex Sequences in the Human Genome - In Silico Study using the R/Bioconductor Package Triplex. - Matej Lexa; Tomás Martínek; Marie Brázdová (BIOINFORMATICS, 2014)