Segmentation of the amygdalo-hippocampal complex by competitive region growing [MRI analysis]. - Marie Chupin; Dominique Hasboun; Fabrice Poupon; Sylvain Baillet; Line Garnero (ISBI, 2002)

Competitive segmentation of the hippocampus and the amygdala from MRI data: validation on young healthy controls and Alzheimer's disease patients. - Marie Chupin; Dominique Hasboun; Romain Mukuna-Bantumbakulu; Éric Bardinet; Sylvain Baillet; Serge Kinkingnéhun; Louis Lemieux; Bruno Dubois; Line Garnero (Image Processing, 2006)

Fully Automatic Segmentation of the Hippocampus and the Amygdala from MRI Using Hybrid Prior Knowledge. - Marie Chupin; Alexander Hammers; Éric Bardinet; Olivier Colliot; Rebecca S. N. Liu; John S. Duncan; Line Garnero; Louis Lemieux (MICCAI (1), 2007)

Anatomically constrained region deformation for the automated segmentation of the hippocampus and the amygdala: Method and validation on controls and patients with Alzheimer's disease. - Marie Chupin; Romain Mukuna-Bantumbakulu; Dominique Hasboun; Éric Bardinet; Sylvain Baillet; Serge Kinkingnéhun; Louis Lemieux; Bruno Dubois; Line Garnero (NeuroImage, 2007)

Fully automatic hippocampus segmentation discriminates between early Alzheimer's disease and normal aging. - Marie Chupin; Gaël Chételat; Louis Lemieux; Bruno Dubois; Line Garnero; Habib Benali; Francis Eustache; Stéphane Lehéricy; Béatrice Desgranges; Olivier Colliot (ISBI, 2008)

Can voxel based morphometry, manual segmentation and automated segmentation equally detect hippocampal volume differences in acute depression? - Loretxu Bergouignan; Marie Chupin; Yvonne Czechowska; Serge Kinkingnéhun; Cédric Lemogne; Guillaume Le Bastard; Martin D. Lepage; Line Garnero; Olivier Colliot; Philippe Fossati (NeuroImage, 2009)

Automatic segmentation of the hippocampus and the amygdala driven by hybrid constraints: Method and validation. - Marie Chupin; Alexander Hammers; Rebecca S. N. Liu; Olivier Colliot; J. Burdett; Éric Bardinet; John S. Duncan; Line Garnero; Louis Lemieux (NeuroImage, 2009)

Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging. - Emilie Gerardin; Gaël Chételat; Marie Chupin; Rémi Cuingnet; Béatrice Desgranges; Hosung Kim; Marc Niethammer; Bruno Dubois; Stéphane Lehéricy; Line Garnero; Francis Eustache; Olivier Colliot (NeuroImage, 2009)

Spatial prior in SVM-based classification of brain images. - Rémi Cuingnet; Marie Chupin; Habib Benali; Olivier Colliot (Computer-Aided Diagnosis, 2010)

Spatial and anatomical regularization of SVM for brain image analysis. - Rémi Cuingnet; Marie Chupin; Habib Benali; Olivier Colliot (NIPS, 2010)

Automatic segmentation of age-related white matter changes on flair images: Method and multicentre validation. - Thomas Samaille; Olivier Colliot; Didier Dormont; Marie Chupin (ISBI, 2011)

Anatomical Regularization on Statistical Manifolds for the Classification of Patients with Alzheimer's Disease. - Rémi Cuingnet; Joan Alexis Glaunès; Marie Chupin; Habib Benali; Olivier Colliot (MLMI, 2011)

Spatial regularization of SVM for the detection of diffusion alterations associated with stroke outcome. - Rémi Cuingnet; Charlotte Rosso; Marie Chupin; Stéphane Lehéricy; Didier Dormont; Habib Benali; Yves Samson; Olivier Colliot (Medical Image Anal., 2011)

Automatic classification of patients with Alzheimer's disease from structural MRI: A comparison of ten methods using the ADNI database. - Rémi Cuingnet; Emilie Gerardin; Jérôme Tessieras; Guillaume Auzias; Stéphane Lehéricy; Marie Odile Habert; Marie Chupin; Habib Benali; Olivier Colliot (NeuroImage, 2011)

Automatic segmentation of white matter hyperintensities robust to multicentre acquisition and pathological variability. - Thomas Samaille; Olivier Colliot; Rémi Cuingnet; Eric Jouvent; Hugues Chabriat; Didier Dormont; Marie Chupin (Image Processing, 2012)

Automatic hippocampal segmentation in temporal lobe epilepsy: Impact of developmental abnormalities. - Hosung Kim; Marie Chupin; Olivier Colliot; Boris C. Bernhardt; Neda Bernasconi; Andrea Bernasconi (NeuroImage, 2012)

Spatial and Anatomical Regularization of SVM: A General Framework for Neuroimaging Data. - Rémi Cuingnet; Joan Alexis Glaunès; Marie Chupin; Habib Benali; Olivier Colliot (IEEE Trans. Pattern Anal. Mach. Intell., 2013)

Phase contrast MRI for discriminating brain microbleed in a multicentre clinical study. - Takoua Kaaouana; Ludovic de Rochefort; Thomas Samaille; Nathalie Thierry; Carole Dufouil; Christine Delmaire; Didier Dormont; Marie Chupin (ATSIP, 2014)

Fast Template-based Shape Analysis Using Diffeomorphic Iterative Centroid. - Claire Cury; Joan Alexis Glaunès; Marie Chupin; Olivier Colliot (MIUA, 2014)

2D harmonic filtering of MR phase images in multicenter clinical setting: Toward a magnetic signature of cerebral microbleeds. - Takoua Kaaouana; Ludovic de Rochefort; Thomas Samaille; Nathalie Thiery; Carole Dufouil; Christine Delmaire; Didier Dormont; Marie Chupin (NeuroImage, 2015)

Intra-subject multi-slab registration: Application to hippocampal ultra-high resolution imaging at 7T. - Linda Marrakchi-Kacem; Alexandre Vignaud; Julien Sein; Johanne Germain; Thomas R. Henry; Cyril Poupon; Lucie Hertz-Pannier; Stéphane Lehéricy; Olivier Colliot; Pierre-François van de Moortele; Marie Chupin (ATSIP, 2016)

Robust imaging of hippocampal inner structure at 7T: in vivo acquisition protocol and methodological choices. - Linda Marrakchi-Kacem; Alexandre Vignaud; Julien Sein; Johanne Germain; Thomas R. Henry; Cyril Poupon; Lucie Hertz-Pannier; Stéphane Lehéricy; Olivier Colliot; Pierre-François van de Moortele; Marie Chupin (CoRR, 2016)

CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. - Grégory Operto; Marie Chupin; Bénédicte Batrancourt; Marie Odile Habert; Olivier Colliot; Habib Benali; Cyril Poupon; Catherine Champseix; Christine Delmaire; Marie Sullivan; Denis Rivière; Mélanie Pélégrini-Issac; et al. (Neuroinformatics, 2016)

Analysis of anatomical variability using diffeomorphic iterative centroid in patients with Alzheimer's disease. - Claire Cury; Joan Alexis Glaunès; Marie Chupin; Olivier Colliot (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2017)

A Diffeomorphic Vector Field Approach to Analyze the Thickness of the Hippocampus From 7 T MRI. - Alexis Guyot; Ana B. Graciano Fouquier; Emilie Gerardin; Marie Chupin; Joan Alexis Glaunès; Linda Marrakchi-Kacem; Johanne Germain; Claire Boutet; Claire Cury; Lucie Hertz-Pannier; Alexandre Vignaud; Stanley Durrleman; et al. (IEEE Trans. Biomed. Eng., 2021)

Learning brain MRI quality control: a multi-factorial generalization problem. - Ghiles Reguig; Marie Chupin; Hugo Dary; Éric Bardinet; Stéphane Lehéricy; Romain Valabrègue (CoRR, 2022)

Association of APOE ε4 with cerebral gray matter volumes in non-demented older adults: The MEMENTO cohort study. - Mélina Régy; Aline Dugravot; Séverine Sabia; Aurore Fayosse; Jean-François Mangin; Marie Chupin; Clara Fischer; Vincent Bouteloup; Carole Dufouil; Geneviève Chêne; Claire Paquet; Bernard Hanseeuw; et al. (NeuroImage, 2022)