Molecular dynamics - Scalable algorithms for molecular dynamics simulations on commodity clusters. - Kevin J. Bowers; Edmond Chow; Huafeng Xu; Ron O. Dror; Michael P. Eastwood; Brent A. Gregersen; John L. Klepeis; István Kolossváry; Mark A. Moraes; Federico D. Sacerdoti; John K. Salmon; Yibing Shan; et al. (SC, 2006)

Anton, a special-purpose machine for molecular dynamics simulation. - David E. Shaw; Martin M. Deneroff; Ron O. Dror; Jeffrey Kuskin; Richard H. Larson; John K. Salmon; Cliff Young; Brannon Batson; Kevin J. Bowers; Jack C. Chao; Michael P. Eastwood; Joseph Gagliardo; et al. (Commun. ACM, 2008)

Millisecond-scale molecular dynamics simulations on Anton. - David E. Shaw; Ron O. Dror; John K. Salmon; J. P. Grossman; Kenneth M. Mackenzie; Joseph A. Bank; Cliff Young; Martin M. Deneroff; Brannon Batson; Kevin J. Bowers; Edmond Chow; Michael P. Eastwood; et al. (SC, 2009)

Exploiting 162-Nanosecond End-to-End Communication Latency on Anton. - Ron O. Dror; J. P. Grossman; Kenneth M. Mackenzie; Brian Towles; Edmond Chow; John K. Salmon; Cliff Young; Joseph A. Bank; Brannon Batson; Martin M. Deneroff; Jeffrey Kuskin; Richard H. Larson; et al. (SC, 2010)

Parallel random numbers: as easy as 1, 2, 3. - John K. Salmon; Mark A. Moraes; Ron O. Dror; David E. Shaw (SC, 2011)

Overcoming Communication Latency Barriers in Massively Parallel Scientific Computation. - Ron O. Dror; J. P. Grossman; Kenneth M. Mackenzie; Brian Towles; Edmond Chow; John K. Salmon; Cliff Young; Joseph A. Bank; Brannon Batson; Martin M. Deneroff; Jeffrey Kuskin; Richard H. Larson; et al. (IEEE Micro, 2011)

Extending the Generality of Molecular Dynamics Simulations on a Special-Purpose Machine. - Daniele Paolo Scarpazza; Douglas J. Ierardi; Adam K. Lerer; Kenneth M. Mackenzie; Albert C. Pan; Joseph A. Bank; Edmond Chow; Ron O. Dror; J. P. Grossman; Daniel Killebrew; Mark A. Moraes; Cristian Predescu; et al. (IPDPS, 2013)

Anton 2: Raising the Bar for Performance and Programmability in a Special-Purpose Molecular Dynamics Supercomputer. - David E. Shaw; J. P. Grossman; Joseph A. Bank; Brannon Batson; J. Adam Butts; Jack C. Chao; Martin M. Deneroff; Ron O. Dror; Amos Even; Christopher H. Fenton; Anthony Forte; Joseph Gagliardo; et al. (SC, 2014)

The ΛNTON 3 ASIC: a Fire-Breathing Monster for Molecular Dynamics Simulations. - Peter J. Adams; Brannon Batson; Alistair Bell; Jhanvi Bhatt; J. Adam Butts; Timothy Correia; Bruce Edwards; Peter Feldmann; Christopher H. Fenton; Anthony Forte; Joseph Gagliardo; Gennette Gill; et al. (HCS, 2021)

Anton 3: twenty microseconds of molecular dynamics simulation before lunch. - David E. Shaw; Peter J. Adams; Asaph Azaria; Joseph A. Bank; Brannon Batson; Alistair Bell; Michael Bergdorf; Jhanvi Bhatt; J. Adam Butts; Timothy Correia; Robert M. Dirks; Ron O. Dror; et al. (SC, 2021)