A New Approach for Gene Annotation Using Unambiguous Sequence Joining. - Alexandre Tchourbanov; Daniel Quest; Hesham H. Ali; Mark A. Pauley; Robert B. Norgren (CSB, 2003)

Java in High-Performance Environments. - Bahador Ghahramani; Mark A. Pauley (Computer, 2003)

A method of precise mRNA/DNA homology-based gene structure prediction. - Alexander G. Churbanov; Mark A. Pauley; Daniel Quest; Hesham H. Ali (BMC Bioinform., 2005)

Large scale analysis of positional effects of single-base mismatches on microarray gene expression data. - Fenghai Duan; Mark A. Pauley; Eliot R. Spindel; Li Zhang; Robert B. Norgren (BioData Min., 2010)

Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). - Lonnie R. Welch; Cath Brooksbank; Russell Schwartz; Sarah L. Morgan; Bruno A. Gaëta; Alastair M. Kilpatrick; Daniel Mietchen; Benjamin L. Moore; Nicola J. Mulder; Mark A. Pauley; William R. Pearson; Predrag Radivojac; et al. (PLoS Comput. Biol., 2016)

Understanding the Essence of Successful Computing Education Projects through Analyzing NSF Proposals: (Abstract Only). - Stephanie E. August; Mark A. Pauley; S. Megan Che; Eileen T. Kraemer; Murali Sitaraman (SIGCSE, 2018)

NSF PROGRAM OFFICERS' VIEWS: CS ed project evaluation. - Stephanie E. August; Mark A. Pauley (Inroads, 2018)

The development and application of bioinformatics core competencies to improve bioinformatics training and education. - Nicola J. Mulder; Russell Schwartz; Michelle D. Brazas; Cath Brooksbank; Bruno A. Gaëta; Sarah L. Morgan; Mark A. Pauley; Anne G. Rosenwald; Gabriella Rustici; Michael L. Sierk; Tandy J. Warnow; Lonnie R. Welch (PLoS Comput. Biol., 2018)

Narratives and Evaluation: How to Write Competitive NSF CS Education Proposals. - Stephanie E. August; S. Megan Che; Eileen T. Kraemer; Mark A. Pauley; Murali Sitaraman (SIGCSE, 2019)

NSF Interactive Discussion: Computer Science Undergraduate Education in 2026 and Beyond. - Stephanie E. August; Alexandra Medina-Borja; Mark A. Pauley; Michael M. Rook (SIGCSE, 2019)

NSF Program Officers' Views: Getting help from your program officer: Cans+Cannots. - Stephanie E. August; Mark A. Pauley (Inroads, 2019)

NSF grant workshop. - Mark A. Pauley (J. Comput. Sci. Coll., 2019)

NSF PROGRAM OFFICERS' VIEWS: Overview of changes to the S-STEM and IUSE programs. - Stephanie E. August; Sami Rollins; Paul Tymann; Mark A. Pauley (Inroads, 2020)