A graphical algorithm for fast computation of identity coefficients and generalized kinship coefficients. - Mark Abney (Bioinform., 2009)

GLOGS: a fast and powerful method for GWAS of binary traits with risk covariates in related populations. - Stephen A. Stanhope; Mark Abney (Bioinform., 2012)

PRIMAL: Fast and Accurate Pedigree-based Imputation from Sequence Data in a Founder Population. - Oren E. Livne; Lide Han; Gorka Alkorta-Aranburu; William Wentworth-Sheilds; Mark Abney; Carole Ober; Dan L. Nicolae (PLoS Comput. Biol., 2015)

Kinpute: using identity by descent to improve genotype imputation. - Mark Abney; Aisha ElSherbiny (Bioinform., 2019)

Application of Equal Local Levels to Improve Q-Q Plot Testing Bands with R Package qqconf. - Eric Weine; Mary Sara McPeek; Mark Abney (J. Stat. Softw., 2023)