Three-dimensional surface reconstruction and fluorescent visualization of cardiac activation. - Mark-Anthony Bray; Shien-Fong Lin; John P. Wikswo Jr. (IEEE Trans. Biomed. Eng., 2000)

Use of topological charge to determine filament location and dynamics in a numerical model of scroll wave activity. - Mark-Anthony Bray; John P. Wikswo (IEEE Trans. Biomed. Eng., 2002)

High-Resolution High-Speed Panoramic Cardiac Imaging System. - Dale W. Evertson; Mark R. Holcomb; Matthew D. C. Eames; Mark-Anthony Bray; Veniamin Y. Sidorov; Junkai Xu; Holley Wingard; Hana M. Dobrovolny; Marcella C. Woods; Daniel J. Gauthier; John P. Wikswo (IEEE Trans. Biomed. Eng., 2008)

Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software. - Lee Kamentsky; Thouis R. Jones; Adam Fraser; Mark-Anthony Bray; David J. Logan; Katherine L. Madden; Vebjorn Ljosa; Curtis Rueden; Kevin W. Eliceiri; Anne E. Carpenter (Bioinform., 2011)

Self-Organization of Muscle Cell Structure and Function. - Anna Grosberg; Po-Ling Kuo; Chin-Lin Guo; Nicholas A. Geisse; Mark-Anthony Bray; William J. Adams; Sean P. Sheehy; Kevin Kit Parker (PLoS Comput. Biol., 2011)

Visualization of Parameter Space for Image Analysis. - A. Johannes Pretorius; Mark-Anthony Bray; Anne E. Carpenter; Roy A. Ruddle (IEEE Trans. Vis. Comput. Graph., 2011)

Automated quantification of Zebrafish tail deformation for high-throughput drug screening. - Omer Ishaq; Joseph Negri; Mark-Anthony Bray; Alexandra Pacureanu; Randall T. Peterson; Carolina Wählby (ISBI, 2013)

ProtocolNavigator: emulation-based software for the design, documentation and reproduction biological experiments. - Imtiaz A. Khan; Adam Fraser; Mark-Anthony Bray; Paul J. Smith; Nick S. White; Anne E. Carpenter; Rachel J. Errington (Bioinform., 2014)

Symmetry-based mitosis detection in time-lapse microscopy. - Topaz Gilad; Mark-Anthony Bray; Anne E. Carpenter; Tammy Riklin Raviv (ISBI, 2015)

Analysis of High-throughput Microscopy Videos: Catching Up with Cell Dynamics. - Assaf Arbelle; N. Drayman; Mark-Anthony Bray; U. Alon; Anne E. Carpenter; Tammy Riklin Raviv (MICCAI (3), 2015)

CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data. - Mark-Anthony Bray; Anne E. Carpenter (BMC Bioinform., 2015)