Protein Subcellular Localization Prediction Using a Hybrid of Similarity Search and Error-Correcting Output Code Techniques That Produces Interpretable Results. - Mark Doderer; Kihoon Yoon; John Salinas; Stephen Kwek (Silico Biol., 2006)

Species Independent Protein Localization Prediction for Multi-compartmentalized Proteins. - Mark Doderer; Kihoon Yoon; Stephen Kwek (MLMTA, 2007)

Discovery of Transcription Factors Using Protein Subcellular Localization Prediction and Gene Expression Profile Analysis. - Amitava Karmaker; Mark Doderer; Stephen Harris; Stephen Kwek (MLMTA, 2007)

Identifying Transcription Regulatory Elements in the Human and Mouse Genomes Using Tissue-specific Gene Expression Profiles. - Amitava Karmaker; Kihoon Yoon; Mark Doderer; Russell Kruzelock; Stephen Kwek (J. Integr. Bioinform., 2007)

SIDEKICK: Genomic data driven analysis and decision-making framework. - Mark Doderer; Kihoon Yoon; Kay A. Robbins (BMC Bioinform., 2010)

Building and analyzing protein interactome networks by cross-species comparisons. - Amy M. Wiles; Mark Doderer; Jianhua Ruan; Tingting Gu; Ravi Dashnamoorthy; Barron Blackman; Alexander J. R. Bishop (BMC Syst. Biol., 2010)

Multisource biological pathway consolidation. - Mark Doderer; Zachry Anguiano; Uthra Suresh; Ravi Dashnamoorthy; Alexander J. R. Bishop; Yidong Chen 002 (GENSiPS, 2011)