Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files. - Mark T. W. Ebbert; Mark E. Wadsworth; Kevin L. Boehme; Kaitlyn L. Hoyt; Aaron R. Sharp; Brendan D. O'Fallon; John S. K. Kauwe; Perry G. Ridge (BMC Bioinform., 2014)

Evaluating the necessity of PCR duplicate removal from next-generation sequencing data and a comparison of approaches. - Mark T. W. Ebbert; Mark E. Wadsworth; Lyndsay A. Staley; Kaitlyn L. Hoyt; Brandon D. Pickett; Justin Miller; John Duce; John S. K. Kauwe; Perry G. Ridge (BMC Bioinform., 2016)