Evaluation of Analytical Methods for Connectivity Map Data. - Jie Cheng; Qing Xie 007; Vinod Kumar; Mark Hurle; Johannes M. Freudenberg; Lun Yang; Pankaj Agarwal (Pacific Symposium on Biocomputing, 2013)

Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets. - Andrew D. Rouillard; Mark Hurle; Pankaj Agarwal (PLoS Comput. Biol., 2018)

Predicting clinically promising therapeutic hypotheses using tensor factorization. - Jin Yao; Mark Hurle; Matthew R. Nelson; Pankaj Agarwal (BMC Bioinform., 2019)